A superfamily is represented by one or more models;
usually there is more than one model representing the superfamily.
Since each model is built to capture the whole superfamily, they are likely to
be overlapping and sometimes are mostly overlapping or even redundant to each
other. Also models often do not score their own seed sequence more highly than
other sequences in the superfamily, so it is a mistake to think that the model
represents the seed sequence.
Plots showing hydrophobicity, match emmission probabilities and
insertion/deletion probabilities can be viewed for each model by following the model ID link.
All 127 SUPERFAMILY models representing the S-adenosyl-L-methionine-dependent methyltransferases superfamily
Model ID | No. of seqs | Build date | Seed sequence | Family of seed |
0051840 |
56 |
2008-09-10 |
d2avda1 |
COMT-like |
0052182 |
3642 |
2008-09-10 |
d2cl5a1 |
COMT-like |
0049474 |
19752 |
2008-09-10 |
d1suia1 |
COMT-like |
0046568 |
4749 |
2008-09-10 |
d1ej0a_ |
RNA methyltransferase FtsJ |
0046744 |
20589 |
2008-09-10 |
d1fbna_ |
Fibrillarin homologue |
0048438 |
19330 |
2008-09-10 |
d1nt2a_ |
Fibrillarin homologue |
0037982 |
845 |
2005-09-08 |
d1g8aa_ |
Fibrillarin homologue |
0048805 |
2202 |
2008-09-10 |
d1prya_ |
Fibrillarin homologue |
0036610 |
2141 |
2005-09-08 |
d1dusa_ |
Hypothetical protein MJ0882 |
0045060 |
3085 |
2005-09-08 |
d1xvaa_ |
Glycine N-methyltransferase |
0049122 |
18911 |
2008-09-10 |
d1r74a_ |
Glycine N-methyltransferase |
0046696 |
19477 |
2008-09-10 |
d1f3la_ |
Arginine methyltransferase |
0048629 |
7181 |
2008-09-10 |
d1oria_ |
Arginine methyltransferase |
0046931 |
20013 |
2008-09-10 |
d1g6q1_ |
Arginine methyltransferase |
0052807 |
19217 |
2008-09-10 |
d2fyta1 |
Arginine methyltransferase |
0047580 |
5673 |
2008-09-10 |
d1jg1a_ |
Protein-L-isoaspartyl O-methyltransferase |
0043085 |
2193 |
2005-09-08 |
d1r18a_ |
Protein-L-isoaspartyl O-methyltransferase |
0046354 |
5737 |
2008-09-10 |
d1dl5a1 |
Protein-L-isoaspartyl O-methyltransferase |
0044689 |
2917 |
2005-09-08 |
d1vbfa_ |
Protein-L-isoaspartyl O-methyltransferase |
0047862 |
32 |
2008-09-10 |
d1kr5a_ |
Protein-L-isoaspartyl O-methyltransferase |
0035026 |
738 |
2005-09-08 |
d1af7a2 |
Chemotaxis receptor methyltransferase CheR, C-terminal domain |
0045988 |
1243 |
2008-09-10 |
d1booa_ |
Type II DNA methylase |
0037952 |
928 |
2005-09-08 |
d1g60a_ |
Type II DNA methylase |
0036976 |
850 |
2005-09-08 |
d1eg2a_ |
Type II DNA methylase |
0046840 |
14655 |
2008-09-10 |
d1fp2a2 |
Plant O-methyltransferase, C-terminal domain |
0040327 |
1226 |
2005-09-08 |
d1kywa2 |
Plant O-methyltransferase, C-terminal domain |
0049074 |
17345 |
2008-09-10 |
d1qzza2 |
Plant O-methyltransferase, C-terminal domain |
0049719 |
21326 |
2008-09-10 |
d1tw3a2 |
Plant O-methyltransferase, C-terminal domain |
0046838 |
15843 |
2008-09-10 |
d1fp1d2 |
Plant O-methyltransferase, C-terminal domain |
0048490 |
24375 |
2008-09-10 |
d1o54a_ |
tRNA(1-methyladenosine) methyltransferase-like |
0047329 |
6890 |
2008-09-10 |
d1i9ga_ |
tRNA(1-methyladenosine) methyltransferase-like |
0051261 |
6305 |
2008-09-10 |
d1yb2a1 |
tRNA(1-methyladenosine) methyltransferase-like |
0051884 |
1764 |
2008-09-10 |
d2b25a1 |
tRNA(1-methyladenosine) methyltransferase-like |
0047386 |
18131 |
2008-09-10 |
d1im8a_ |
Hypothetical protein HI0319 (YecO) |
0047211 |
935 |
2008-09-10 |
d1hnna_ |
Arylamine N-methyltransferase |
0051679 |
693 |
2008-09-10 |
d2a14a1 |
Arylamine N-methyltransferase |
0051657 |
1045 |
2008-09-10 |
d1zx0a1 |
Guanidinoacetate methyltransferase |
0050919 |
979 |
2008-09-10 |
d1xcla_ |
Guanidinoacetate methyltransferase |
0050988 |
18746 |
2008-09-10 |
d1xj5a_ |
Spermidine synthase |
0039093 |
638 |
2005-09-08 |
d1inla_ |
Spermidine synthase |
0047471 |
18390 |
2008-09-10 |
d1iy9a_ |
Spermidine synthase |
0051885 |
20018 |
2008-09-10 |
d2b2ca1 |
Spermidine synthase |
0053229 |
2152 |
2008-09-10 |
d2o07a1 |
Spermidine synthase |
0049915 |
18310 |
2008-09-10 |
d1uira_ |
Spermidine synthase |
0040964 |
826 |
2005-09-08 |
d1mjfa_ |
Spermidine synthase |
0040196 |
2051 |
2005-09-08 |
d1kpga_ |
Mycolic acid cyclopropane synthase |
0049671 |
19779 |
2008-09-10 |
d1tpya_ |
Mycolic acid cyclopropane synthase |
0047919 |
19364 |
2008-09-10 |
d1l1ea_ |
Mycolic acid cyclopropane synthase |
0054332 |
7946 |
2010-05-31 |
d2o57a1 |
Mycolic acid cyclopropane synthase |
0047851 |
8505 |
2008-09-10 |
d1kpia_ |
Mycolic acid cyclopropane synthase |
0052709 |
4807 |
2008-09-10 |
d2fk8a1 |
Mycolic acid cyclopropane synthase |
0047656 |
810 |
2008-09-10 |
d1jqea_ |
Histamine methyltransferase |
0047676 |
12359 |
2008-09-10 |
d1jsxa_ |
Glucose-inhibited division protein B (GidB) |
0050935 |
10067 |
2008-09-10 |
d1xdza_ |
Glucose-inhibited division protein B (GidB) |
0041444 |
2849 |
2005-09-08 |
d1nkva_ |
Hypothetical Protein YjhP |
0047923 |
24076 |
2008-09-10 |
d1l3ia_ |
Precorrin-6Y methyltransferase (CbiT) |
0040829 |
2327 |
2005-09-08 |
d1m6ya2 |
MraW-like putative methyltransferases |
0050519 |
1441 |
2008-09-10 |
d1wg8a2 |
MraW-like putative methyltransferases |
0049069 |
2189 |
2008-09-10 |
d1qyra_ |
rRNA adenine dimethylase-like |
0051617 |
6693 |
2008-09-10 |
d1zq9a1 |
rRNA adenine dimethylase-like |
0042682 |
1174 |
2005-09-08 |
d1qama_ |
rRNA adenine dimethylase-like |
0045109 |
2078 |
2005-09-08 |
d1yuba_ |
rRNA adenine dimethylase-like |
0047303 |
2306 |
2008-09-10 |
d1i4wa_ |
rRNA adenine dimethylase-like |
0050038 |
83 |
2008-09-10 |
d1v39a_ |
mRNA cap methylase |
0047945 |
8628 |
2008-09-10 |
d1l9ka_ |
mRNA cap methylase |
0046923 |
1675 |
2008-09-10 |
d1g55a_ |
C5 cytosine-specific DNA methylase, DCM |
0045633 |
602 |
2005-09-08 |
d6mhta_ |
C5 cytosine-specific DNA methylase, DCM |
0046303 |
1768 |
2008-09-10 |
d1dcta_ |
C5 cytosine-specific DNA methylase, DCM |
0053087 |
4529 |
2008-09-10 |
d2ibta1 |
DNA methylase TaqI, N-terminal domain |
0052484 |
593 |
2008-09-10 |
d2dpma_ |
N6 adenine-specific DNA methylase, DAM |
0048856 |
595 |
2008-09-10 |
d1q0sa_ |
N6 adenine-specific DNA methylase, DAM |
0048524 |
1346 |
2008-09-10 |
d1o9ga_ |
rRNA methyltransferase AviRa |
0049532 |
16057 |
2008-09-10 |
d1t43a_ |
N5-glutamine methyltransferase, HemK |
0041580 |
3390 |
2005-09-08 |
d1nv8a_ |
N5-glutamine methyltransferase, HemK |
0049778 |
685 |
2008-09-10 |
d1u2za_ |
Catalytic, N-terminal domain of histone methyltransferase Dot1l |
0041593 |
569 |
2005-09-08 |
d1nw3a_ |
Catalytic, N-terminal domain of histone methyltransferase Dot1l |
0041326 |
2548 |
2005-09-08 |
d1ne2a_ |
Ta1320-like |
0050749 |
9294 |
2008-09-10 |
d1wy7a1 |
Ta1320-like |
0042197 |
3517 |
2005-09-08 |
d1p91a_ |
rRNA methyltransferase RlmA |
0049171 |
9566 |
2008-09-10 |
d1ri5a_ |
mRNA cap (Guanine N-7) methyltransferase |
0048106 |
349 |
2008-09-10 |
d1m6ex_ |
Salicylic acid carboxyl methyltransferase (SAMT) |
0048774 |
585 |
2008-09-10 |
d1pjza_ |
Thiopurine S-methyltransferase |
0052084 |
587 |
2008-09-10 |
d2bzga1 |
Thiopurine S-methyltransferase |
0049186 |
816 |
2008-09-10 |
d1rjda_ |
Leucine carboxy methyltransferase Ppm1 |
0049442 |
5549 |
2008-09-10 |
d1sqga2 |
NOL1/NOP2/sun |
0051944 |
4826 |
2008-09-10 |
d2b9ea1 |
NOL1/NOP2/sun |
0047465 |
7214 |
2008-09-10 |
d1ixka_ |
NOL1/NOP2/sun |
0049885 |
18171 |
2008-09-10 |
d1ufka_ |
Ribosomal protein L11 methyltransferase PrmA |
0044550 |
3047 |
2005-09-08 |
d1uwva2 |
(Uracil-5-)-methyltransferase |
0050242 |
15940 |
2008-09-10 |
d1vlma_ |
UbiE/COQ5-like |
0051842 |
15247 |
2008-09-10 |
d2avna1 |
UbiE/COQ5-like |
0054473 |
4881 |
2010-05-31 |
d2p7ia1 |
UbiE/COQ5-like |
0051143 |
18621 |
2008-09-10 |
d1xxla_ |
UbiE/COQ5-like |
0050234 |
18259 |
2008-09-10 |
d1vl5a_ |
UbiE/COQ5-like |
0052536 |
4457 |
2008-09-10 |
d2ex4a1 |
AD-003 protein-like |
0051103 |
24097 |
2008-09-10 |
d1xtpa_ |
AD-003 protein-like |
0050762 |
19746 |
2008-09-10 |
d1wzna1 |
CAC2371-like |
0050154 |
18248 |
2008-09-10 |
d1ve3a1 |
CAC2371-like |
0051239 |
8201 |
2008-09-10 |
d1y8ca_ |
CAC2371-like |
0053077 |
11844 |
2008-09-10 |
d2i6ga1 |
TehB-like |
0052618 |
9340 |
2008-09-10 |
d2f8la1 |
N-6 DNA Methylase-like |
0051816 |
1629 |
2008-09-10 |
d2ar0a1 |
N-6 DNA Methylase-like |
0054378 |
3866 |
2010-05-31 |
d2okca1 |
N-6 DNA Methylase-like |
0053107 |
10757 |
2008-09-10 |
d2ifta1 |
YhhF-like |
0050693 |
1787 |
2008-09-10 |
d1ws6a1 |
YhhF-like |
0052693 |
2778 |
2008-09-10 |
d2fhpa1 |
YhhF-like |
0052739 |
3082 |
2008-09-10 |
d2fpoa1 |
YhhF-like |
0052510 |
17 |
2008-09-10 |
d2esra1 |
YhhF-like |
0052749 |
1059 |
2008-09-10 |
d2frna1 |
Met-10+ protein-like |
0052949 |
193 |
2008-09-10 |
d2gtia1 |
Nsp15 N-terminal domain-like |
0052992 |
185 |
2008-09-10 |
d2h85a1 |
Nsp15 N-terminal domain-like |
0052894 |
42 |
2008-09-10 |
d2gh1a1 |
BC2162-like |
0052001 |
673 |
2008-09-10 |
d2bm8a1 |
CmcI-like |
0051930 |
21145 |
2008-09-10 |
d2b78a2 |
hypothetical RNA methyltransferase |
0053110 |
4115 |
2008-09-10 |
d2igta1 |
hypothetical RNA methyltransferase |
0050745 |
21325 |
2008-09-10 |
d1wxxa2 |
hypothetical RNA methyltransferase |
0051823 |
19441 |
2008-09-10 |
d2as0a2 |
hypothetical RNA methyltransferase |
0051588 |
615 |
2008-09-10 |
d1zkda1 |
RPA4359-like |
0051449 |
20726 |
2008-09-10 |
d1yzha1 |
TrmB-like |
0052649 |
20602 |
2008-09-10 |
d2fcaa1 |
TrmB-like |
0052982 |
23 |
2008-09-10 |
d2h00a1 |
Methyltransferase 10 domain |
0054432 |
870 |
2010-05-31 |
d2oyra1 |
YhiQ-like |
0054520 |
733 |
2010-05-31 |
d2pkwa1 |
YhiQ-like |
0054557 |
718 |
2010-05-31 |
d2py6a1 |
FkbM-like |
0054686 |
714 |
2010-05-31 |
d2uyoa1 |
ML2640-like |
0053855 |
1243 |
2010-05-31 |
d2dula1 |
TRM1-like |
0054391 |
341 |
2010-05-31 |
d2oo3a1 |
LPG1296-like |