SUPERFAMILY 1.75 HMM library and genome assignments server

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ALDH-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 15 SUPERFAMILY models representing the ALDH-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0034877 2751 2005-09-08 d1a4sa_ ALDH-like
0040316 2776 2005-09-08 d1ky8a_ ALDH-like
0036174 2781 2005-09-08 d1cw3a_ ALDH-like
0041750 2791 2005-09-08 d1o9ja_ ALDH-like
0035037 2786 2005-09-08 d1ag8a_ ALDH-like
0037277 2577 2005-09-08 d1ez0a_ ALDH-like
0044883 1078 2005-09-08 d1vlua_ ALDH-like
0035766 2767 2005-09-08 d1bxsa_ ALDH-like
0035003 2817 2005-09-08 d1ad3a_ ALDH-like
0041670 2166 2005-09-08 d1o20a_ ALDH-like
0050666 10453 2008-09-10 d1wnda_ ALDH-like
0037193 2815 2005-09-08 d1euha_ ALDH-like
0044574 2692 2005-09-08 d1uzba_ ALDH-like
0035565 2746 2005-09-08 d1bi9a_ ALDH-like
0047758 5216 2008-09-10 d1k75a_ L-histidinol dehydrogenase HisD