SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Thioesterase/thiol ester dehydrase-isomerase superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 57 SUPERFAMILY models representing the Thioesterase/thiol ester dehydrase-isomerase superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0052881 1541 2008-09-10 d2gf6a1 4HBT-like
0054377 2118 2010-05-31 d2oiwa1 4HBT-like
0051338 2131 2008-09-10 d1ylia1 4HBT-like
0053052 987 2008-09-10 d2hx5a1 4HBT-like
0051794 2063 2008-09-10 d2alia1 4HBT-like
0052351 2618 2008-09-10 d2cyea1 4HBT-like
0052966 1589 2008-09-10 d2gvha2 4HBT-like
0046019 2559 2008-09-10 d1bvqa_ 4HBT-like
0051494 1239 2008-09-10 d1z54a1 4HBT-like
0052780 1889 2008-09-10 d2fuja1 4HBT-like
0054352 702 2010-05-31 d2oafa1 4HBT-like
0041428 815 2005-09-08 d1njka_ 4HBT-like
0051233 1997 2008-09-10 d1y7ua1 4HBT-like
0053021 705 2008-09-10 d2hlja1 4HBT-like
0052965 1941 2008-09-10 d2gvha1 4HBT-like
0053213 2186 2008-09-10 d2nuja1 4HBT-like
0049325 2546 2008-09-10 d1s5ua_ 4HBT-like
0050275 2361 2008-09-10 d1vpma_ 4HBT-like
0051839 2195 2008-09-10 d2av9a1 4HBT-like
0048175 843 2008-09-10 d1mkaa_ beta-Hydroxydecanol thiol ester dehydrase
0046093 339 2008-09-10 d1c8ua1 Acyl-CoA thioesterase
0049589 306 2008-09-10 d1tbua1 Acyl-CoA thioesterase
0046094 381 2008-09-10 d1c8ua2 Acyl-CoA thioesterase
0048790 1719 2008-09-10 d1pn2a2 MaoC-like
0042635 895 2005-09-08 d1q6wa_ MaoC-like
0049346 343 2008-09-10 d1s9ca2 MaoC-like
0051976 1726 2008-09-10 d2bi0a1 MaoC-like
0047414 1538 2008-09-10 d1iq6a_ MaoC-like
0048789 339 2008-09-10 d1pn2a1 MaoC-like
0052099 2194 2008-09-10 d2c2ia1 MaoC-like
0049345 1774 2008-09-10 d1s9ca1 MaoC-like
0051892 2604 2008-09-10 d2b3na1 MaoC-like
0051977 342 2008-09-10 d2bi0a2 MaoC-like
0052559 1979 2008-09-10 d2f0xa1 PaaI/YdiI-like
0048889 2214 2008-09-10 d1q4ta_ PaaI/YdiI-like
0050180 2158 2008-09-10 d1vh9a_ PaaI/YdiI-like
0049564 175 2008-09-10 d1t82a_ PaaI/YdiI-like
0047497 2276 2008-09-10 d1j1ya_ PaaI/YdiI-like
0048813 2429 2008-09-10 d1psua_ PaaI/YdiI-like
0050179 2131 2008-09-10 d1vh5a_ PaaI/YdiI-like
0051590 3027 2008-09-10 d1zkia1 PaaI/YdiI-like
0052350 2915 2008-09-10 d2cy9a1 PaaI/YdiI-like
0054422 1371 2010-05-31 d2ov9a1 PaaI/YdiI-like
0048478 2152 2008-09-10 d1o0ia_ PaaI/YdiI-like
0049396 2542 2008-09-10 d1sh8a_ PaaI/YdiI-like
0051358 1743 2008-09-10 d1yoca1 PaaI/YdiI-like
0052592 887 2008-09-10 d2f41a1 PaaI/YdiI-like
0047466 3617 2008-09-10 d1ixla_ PaaI/YdiI-like
0053001 2819 2008-09-10 d2hboa1 PaaI/YdiI-like
0051502 1059 2008-09-10 d1z6ba1 FabZ-like
0044191 508 2005-09-08 d1u1za_ FabZ-like
0052337 157 2008-09-10 d2cwza1 TTHA0967-like
0054580 171 2010-05-31 d2q78a1 TTHA0967-like
0054425 868 2010-05-31 d2owna1 Acyl-ACP thioesterase-like
0052512 509 2008-09-10 d2essa2 Acyl-ACP thioesterase-like
0052511 659 2008-09-10 d2essa1 Acyl-ACP thioesterase-like
0054426 1298 2010-05-31 d2owna2 Acyl-ACP thioesterase-like