SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Signal recognition particle alu RNA binding heterodimer, SRP9/14 superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 4 SUPERFAMILY models representing the Signal recognition particle alu RNA binding heterodimer, SRP9/14 superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0034792 38 2005-09-08 d1914a2 Signal recognition particle alu RNA binding heterodimer, SRP9/14
0036839 38 2005-09-08 d1e8ob_ Signal recognition particle alu RNA binding heterodimer, SRP9/14
0034791 25 2005-09-08 d1914a1 Signal recognition particle alu RNA binding heterodimer, SRP9/14
0036838 26 2005-09-08 d1e8oa_ Signal recognition particle alu RNA binding heterodimer, SRP9/14