SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

beta-N-acetylhexosaminidase-like domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 8 SUPERFAMILY models representing the beta-N-acetylhexosaminidase-like domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0038663 505 2005-09-08 d1hp5a2 beta-N-acetylhexosaminidase domain
0042698 92 2005-09-08 d1qbaa4 beta-N-acetylhexosaminidase domain
0053949 381 2010-05-31 d2gjxa2 beta-N-acetylhexosaminidase domain
0048405 210 2008-09-10 d1nowa2 beta-N-acetylhexosaminidase domain
0047767 134 2008-09-10 d1k9da2 alpha-D-glucuronidase, N-terminal domain
0038229 32 2005-09-08 d1gqia2 alpha-D-glucuronidase, N-terminal domain
0052169 544 2008-09-10 d2choa3 Hyaluronidase N-terminal domain-like
0052140 523 2008-09-10 d2cbia3 Hyaluronidase N-terminal domain-like