SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Creatinase/aminopeptidase superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 9 SUPERFAMILY models representing the Creatinase/aminopeptidase superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0045044 1032 2005-09-08 d1xgsa2 Creatinase/aminopeptidase
0041657 985 2005-09-08 d1o0xa_ Creatinase/aminopeptidase
0035818 1078 2005-09-08 d1c22a_ Creatinase/aminopeptidase
0043037 1147 2005-09-08 d1qxya_ Creatinase/aminopeptidase
0040193 895 2005-09-08 d1kp0a2 Creatinase/aminopeptidase
0035370 721 2005-09-08 d1b6aa2 Creatinase/aminopeptidase
0052072 4463 2008-09-10 d2bwva2 Creatinase/aminopeptidase
0042482 1236 2005-09-08 d1pv9a2 Creatinase/aminopeptidase
0035987 949 2005-09-08 d1chma2 Creatinase/aminopeptidase