SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Metallo-dependent phosphatases superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 29 SUPERFAMILY models representing the Metallo-dependent phosphatases superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0048962 563 2008-09-10 d1qhwa_ Purple acid phosphatase-like
0051159 5331 2008-09-10 d1xzwa2 Purple acid phosphatase-like
0053347 5082 2008-09-10 d4kbpa2 Purple acid phosphatase-like
0044518 507 2005-09-08 d1utea_ Purple acid phosphatase-like
0054882 1113 2010-05-31 d3c9fa2 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
0047216 1754 2008-09-10 d1hp1a2 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
0054758 1913 2010-05-31 d2z1aa2 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
0037943 1020 2005-09-08 d1g5ba_ Protein serine/threonine phosphatase
0045823 2140 2008-09-10 d1auia_ Protein serine/threonine phosphatase
0049342 2069 2008-09-10 d1s95a_ Protein serine/threonine phosphatase
0053225 2094 2008-09-10 d2nymc1 Protein serine/threonine phosphatase
0049330 1768 2008-09-10 d1s70a_ Protein serine/threonine phosphatase
0046803 2152 2008-09-10 d1fjma_ Protein serine/threonine phosphatase
0039040 719 2005-09-08 d1ii7a_ DNA double-strand break repair nuclease
0041478 164 2005-09-08 d1nnwa_ Phosphoesterase-related
0054745 187 2010-05-31 d2yvta1 TT1561-like
0049880 170 2008-09-10 d1uf3a_ TT1561-like
0043485 613 2005-09-08 d1s3la_ YfcE-like
0049468 5302 2008-09-10 d1su1a_ YfcE-like
0054894 1267 2010-05-31 d3ck2a1 YfcE-like
0051688 675 2008-09-10 d2a22a1 YfcE-like
0051479 5152 2008-09-10 d1z2wa1 YfcE-like
0051021 5253 2008-09-10 d1xm7a_ Hypothetical protein aq 1666
0049558 1408 2008-09-10 d1t71a_ DR1281-like
0049557 1021 2008-09-10 d1t70a_ DR1281-like
0052321 535 2008-09-10 d2cv9a1 TTHA0625-like
0054913 3396 2010-05-31 d3d03a1 GpdQ-like
0054068 3392 2010-05-31 d2hy1a1 GpdQ-like
0054306 1000 2010-05-31 d2nxfa1 ADPRibase-Mn-like