SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

omega toxin-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 46 SUPERFAMILY models representing the omega toxin-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0046861 6 2008-09-10 d1fu3a_ Conotoxin
0049215 7 2008-09-10 d1rmka_ Conotoxin
0036070 13 2005-09-08 d1cnna_ Conotoxin
0045772 5 2008-09-10 d1ag7a_ Conotoxin
0041106 13 2005-09-08 d1mvja_ Conotoxin
0046695 4 2008-09-10 d1f3ka_ Conotoxin
0047468 4 2008-09-10 d1ixta_ Conotoxin
0048599 3 2008-09-10 d1omca_ Conotoxin
0046885 43 2008-09-10 d1fyga_ Conotoxin
0047782 4 2008-09-10 d1kcpa_ Conotoxin
0049689 43 2008-09-10 d1ttka_ Conotoxin
0037891 5 2005-09-08 d1g1pa_ Conotoxin
0046655 5 2008-09-10 d1eyoa_ Conotoxin
0046086 7 2008-09-10 d1c6wa_ Spider toxins
0048039 16 2008-09-10 d1lupa_ Spider toxins
0046591 5 2008-09-10 d1emxa_ Spider toxins
0047999 2 2008-09-10 d1lmma_ Spider toxins
0051186 8 2008-09-10 d1y29a_ Spider toxins
0046249 47 2008-09-10 d1d1ha_ Spider toxins
0046951 7 2008-09-10 d1g9pa_ Spider toxins
0047849 47 2008-09-10 d1koza_ Spider toxins
0048376 6 2008-09-10 d1niya_ Spider toxins
0050082 16 2008-09-10 d1v7fa_ Spider toxins
0045837 20 2008-09-10 d1axha_ Spider toxins
0048034 38 2008-09-10 d1lu8a_ Spider toxins
0048973 12 2008-09-10 d1qk7a_ Spider toxins
0046567 28 2008-09-10 d1eita_ Spider toxins
0047288 28 2008-09-10 d1i25a_ Spider toxins
0047950 47 2008-09-10 d1la4a_ Spider toxins
0042823 9 2005-09-08 d1qk6a_ Spider toxins
0046153 5 2008-09-10 d1cixa_ Spider toxins
0048130 8 2008-09-10 d1mb6a_ Spider toxins
0045774 13 2008-09-10 d1agga_ Spider toxins
0047351 7 2008-09-10 d1ie6a_ Spider toxins
0048932 8 2008-09-10 d1qdpa_ Spider toxins
0046352 5 2008-09-10 d1dl0a_ Spider toxins
0047245 20 2008-09-10 d1hvwa_ Spider toxins
0047859 29 2008-09-10 d1kqha_ Spider toxins
0048528 8 2008-09-10 d1oawa_ Spider toxins
0050311 8 2008-09-10 d1vtxa_ Spider toxins
0041418 9 2005-09-08 d1nixa_ Spider toxins
0047289 2 2008-09-10 d1i26a_ Insect toxins
0048000 3 2008-09-10 d1lmra_ Insect toxins
0047685 37 2008-09-10 d1ju8a_ Albumin 1
0048710 37 2008-09-10 d1p8ba_ Albumin 1
0050987 33 2008-09-10 d1xj1a_ Vhv1.1, polydnaviral gene product