SUPERFAMILY 1.75 HMM library and genome assignments server

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Leech antihemostatic proteins superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 8 SUPERFAMILY models representing the Leech antihemostatic proteins superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0046570 97 2008-09-10 d1ejab_ Huristasin-like
0043652 56 2005-09-08 d1skza1 Huristasin-like
0049419 63 2008-09-10 d1skza2 Huristasin-like
0035754 6 2005-09-08 d1bx7a_ Huristasin-like
0046312 2 2008-09-10 d1deca_ Hirudin-like
0053345 33 2008-09-10 d4htci_ Hirudin-like
0046434 5 2008-09-10 d1e0fi_ Hirudin-like
0047229 33 2008-09-10 d1hrti_ Hirudin-like