SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Snake toxin-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 42 SUPERFAMILY models representing the Snake toxin-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0037525 167 2005-09-08 d1ffja_ Snake venom toxins
0041559 257 2005-09-08 d1ntna_ Snake venom toxins
0045214 168 2005-09-08 d2cdxa_ Snake venom toxins
0050121 519 2008-09-10 d1vb0a_ Snake venom toxins
0037447 232 2005-09-08 d1f94a_ Snake venom toxins
0044003 167 2005-09-08 d1tgxa_ Snake venom toxins
0048210 273 2008-09-10 d1mr6a_ Snake venom toxins
0052991 891 2008-09-10 d2h7zb1 Snake venom toxins
0035991 168 2005-09-08 d1chvs_ Snake venom toxins
0038815 168 2005-09-08 d1i02a_ Snake venom toxins
0052301 262 2008-09-10 d2ctxa_ Snake venom toxins
0034988 222 2005-09-08 d1abta_ Snake venom toxins
0037520 235 2005-09-08 d1ff4a_ Snake venom toxins
0040646 231 2005-09-08 d1lsia_ Snake venom toxins
0045147 222 2005-09-08 d2abxa_ Snake venom toxins
0050068 518 2008-09-10 d1v6pa_ Snake venom toxins
0040013 167 2005-09-08 d1kbsa_ Snake venom toxins
0043996 279 2005-09-08 d1tfsa_ Snake venom toxins
0047584 570 2008-09-10 d1jgka_ Snake venom toxins
0052990 718 2008-09-10 d2h7za1 Snake venom toxins
0035927 168 2005-09-08 d1cdta_ Snake venom toxins
0037959 157 2005-09-08 d1g6ma_ Snake venom toxins
0041562 166 2005-09-08 d1ntxa_ Snake venom toxins
0045505 166 2005-09-08 d3ebxa_ Snake venom toxins
0050313 242 2008-09-10 d1vyca_ Snake venom toxins
0037471 164 2005-09-08 d1fasa_ Snake venom toxins
0040309 166 2005-09-08 d1kxia_ Snake venom toxins
0044150 255 2005-09-08 d1txba_ Snake venom toxins
0040008 180 2005-09-08 d1kbaa_ Snake venom toxins
0042858 165 2005-09-08 d1qm7a_ Snake venom toxins
0047417 176 2008-09-10 d1iq9a_ Snake venom toxins
0052986 831 2008-09-10 d2h5fa1 Snake venom toxins
0036572 167 2005-09-08 d1drsa_ Dendroaspin
0035701 156 2005-09-08 d1btea_ Extracellular domain of cell surface receptors
0054108 44 2010-05-31 d2i9be3 Extracellular domain of cell surface receptors
0040232 77 2005-09-08 d1ks6a_ Extracellular domain of cell surface receptors
0041635 163 2005-09-08 d1nysa_ Extracellular domain of cell surface receptors
0046116 918 2008-09-10 d1cdqa_ Extracellular domain of cell surface receptors
0053911 603 2010-05-31 d2fd6u2 Extracellular domain of cell surface receptors
0037155 315 2005-09-08 d1es7b_ Extracellular domain of cell surface receptors
0048780 52 2008-09-10 d1ploa_ Extracellular domain of cell surface receptors
0053910 235 2010-05-31 d2fd6u1 Extracellular domain of cell surface receptors