SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Metallothionein superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 18 SUPERFAMILY models representing the Metallothionein superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036498 11 2005-09-08 d1dmea_ Metallothionein
0040935 48 2005-09-08 d1mhua_ Metallothionein
0039576 11 2005-09-08 d1jjda_ Metallothionein
0045598 65 2005-09-08 d4mt2a_ Metallothionein
0039375 12 2005-09-08 d1j5la_ Metallothionein
0042815 5 2005-09-08 d1qjla_ Metallothionein
0036497 12 2005-09-08 d1dmca_ Metallothionein
0040718 19 2005-09-08 d1m0ja_ Metallothionein
0049522 4 2008-09-10 d1t2ya_ Metallothionein
0039564 49 2005-09-08 d1ji9a_ Metallothionein
0045371 37 2005-09-08 d2mrba_ Metallothionein
0037672 2 2005-09-08 d1fmya_ Metallothionein
0042814 7 2005-09-08 d1qjka_ Metallothionein
0036407 48 2005-09-08 d1dfsa_ Metallothionein
0040717 44 2005-09-08 d1m0ga_ Metallothionein
0046327 30 2008-09-10 d1dfta_ Metallothionein
0039376 11 2005-09-08 d1j5ma_ Metallothionein
0045363 36 2005-09-08 d2mhua_ Metallothionein