SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Leucine zipper domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 43 SUPERFAMILY models representing the Leucine zipper domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0053415 229 2009-01-20 d1fose_ Leucine zipper domain
0053462 5 2009-01-20 d1kd8f_ Leucine zipper domain
0053527 70 2009-01-20 d1unxb_ Leucine zipper domain
0053556 77 2009-01-20 d2bnic1 Leucine zipper domain
0054638 1 2010-05-31 d2r2va1 Leucine zipper domain
0053398 63 2009-01-20 d1ce9c_ Leucine zipper domain
0053444 66 2009-01-20 d1ij1c_ Leucine zipper domain
0053518 342 2009-01-20 d1t2kd_ Leucine zipper domain
0053548 5 2009-01-20 d1zmed2 Leucine zipper domain
0053602 18 2010-05-31 d1rb5a_ Leucine zipper domain
0053389 115 2009-01-20 d1a93a_ Leucine zipper domain
0053423 927 2009-01-20 d1gd2g_ Leucine zipper domain
0053490 1255 2009-01-20 d1nwqc_ Leucine zipper domain
0053533 66 2009-01-20 d1w5gb_ Leucine zipper domain
0053564 77 2009-01-20 d2g9ja1 Leucine zipper domain
0054868 11 2010-05-31 d3c3fb1 Leucine zipper domain
0053403 1745 2009-01-20 d1dh3a_ Leucine zipper domain
0053461 5 2009-01-20 d1kd8d_ Leucine zipper domain
0053526 78 2009-01-20 d1unta_ Leucine zipper domain
0053552 36 2009-01-20 d2b22a1 Leucine zipper domain
0054340 13 2010-05-31 d2o7ha1 Leucine zipper domain
0053397 80 2009-01-20 d1ce0c_ Leucine zipper domain
0053436 39 2009-01-20 d1hbwa_ Leucine zipper domain
0053517 2464 2009-01-20 d1t2kc_ Leucine zipper domain
0053545 447 2009-01-20 d1ysad_ Leucine zipper domain
0053572 35 2009-01-20 d2hy6e1 Leucine zipper domain
0054870 11 2010-05-31 d3c3fd1 Leucine zipper domain
0053422 78 2009-01-20 d1gcmb_ Leucine zipper domain
0053463 5 2009-01-20 d1kd9f_ Leucine zipper domain
0053528 78 2009-01-20 d1uo1b_ Leucine zipper domain
0053557 13 2009-01-20 d2c9lz1 Leucine zipper domain
0054867 11 2010-05-31 d3c3fa1 Leucine zipper domain
0053399 1340 2009-01-20 d1ci6a_ Leucine zipper domain
0053457 121 2009-01-20 d1juna_ Leucine zipper domain
0053523 77 2009-01-20 d1u9fd_ Leucine zipper domain
0053551 44 2009-01-20 d2b1fc1 Leucine zipper domain
0053696 18 2010-05-31 d2ahpa1 Leucine zipper domain
0053390 56 2009-01-20 d1a93b_ Leucine zipper domain
0053434 297 2009-01-20 d1h88b_ Leucine zipper domain
0053495 8 2009-01-20 d1pyia2 Leucine zipper domain
0053534 57 2009-01-20 d1w5ja_ Leucine zipper domain
0053570 18 2009-01-20 d2hapd2 Leucine zipper domain
0054869 11 2010-05-31 d3c3fc1 Leucine zipper domain