SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Calcium-dependent phosphotriesterase superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 5 SUPERFAMILY models representing the Calcium-dependent phosphotriesterase superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0052901 6401 2008-09-10 d2ghsa1 SGL-like
0046436 11822 2008-09-10 d1e1aa_ SGL-like
0052427 2175 2008-09-10 d2dg1a1 SGL-like
0050023 5930 2008-09-10 d1v04a_ Serum paraoxonase/arylesterase 1, PON1
0054459 2571 2010-05-31 d2p4oa1 All0351-like