SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

MoeA C-terminal domain-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 5 SUPERFAMILY models representing the MoeA C-terminal domain-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0043849 105 2005-09-08 d1t3ea1 MoeA C-terminal domain-like
0050021 636 2008-09-10 d1uz5a1 MoeA C-terminal domain-like
0050974 817 2008-09-10 d1xi8a1 MoeA C-terminal domain-like
0046943 591 2008-09-10 d1g8la1 MoeA C-terminal domain-like
0050700 671 2008-09-10 d1wu2a1 MoeA C-terminal domain-like