SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 5 SUPERFAMILY models representing the a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0048907 29998 2008-09-10 d1q90d_ a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
0035452 1991 2005-09-08 d1bccc2 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
0037289 2000 2005-09-08 d1ezvc2 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
0053865 4699 2010-05-31 d2e74b1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
0035489 1998 2005-09-08 d1be3c2 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)