|
|
Plant ANatomical entity (PAN): whole plant
(show info)
Phenotype Ontology
Like Gene Ontology (GO), phenotypy ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Phenotype ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology (DO) DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology (HP) HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology (MP) MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology (WP) WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology (YP) Based on YP which is the major contributor to the Ascomycete phenotype ontology, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology (FP) FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology (FA) FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology (ZA) ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology (XA) XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology (AP) As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology (EC) Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- DrugBank ATC (DB) Ontology (DB) In the Anatomical Therapeutic Chemical (ATC) classification system, drugs are classified in groups at five different levels according to the organ or system (1st level, anatomical main group) on which they act and their therapeutic (2nd level, therapeutic subgroup), pharmacological (3rd level, pharmacological subgroup) and chemical properties (4th level, chemical subgroup; 5th level, chemical substance). Only drugs in DrugBank are considered.
- UniProtKB KeyWords (KW) Ontology (KW) Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- UniProtKB UniPathway (UP) Ontology (UP) UP is a fully manually curated resource for the representation and annotation of metabolic pathways, being used as controlled vocabulary for pathway annotation in UniProtKB.
Structural Domain Phenotype Ontology and its Annotations
Structural Classification of Proteins (SCOP) classifies evolutionary-related domains into Superfamily level and Family level. Using the phenotype ontologies above, we have generated the domain-centric phenotype annotations, and further identified those phenotype terms which are the most informative to annotate SCOP domains. Promisingly, domain-centric phenotypic annotations can serve as an alternative starting point to explore genotype-phenotype relationships. We provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Structural Domain Disease Ontology (DO) Ontology (SDDO) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DO.txt, and the corresponding ontology:SDDO.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Human Phenotype (HP) Ontology (SDHP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2HP.txt, and the corresponding ontology:SDHP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Mouse Phenotype (MP) Ontology (SDMP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2MP.txt, and the corresponding ontology:SDMP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Worm Phenotype (WP) Ontology (SDWP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2WP.txt, and the corresponding ontology:SDWP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Yeast Phenotype (YP) Ontology (SDYP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2YP.txt, and the corresponding ontology:SDYP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Phenotype (FP) Ontology (SDFP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FP.txt, and the corresponding ontology:SDFP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Anatomy (FA) Ontology (SDFA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FA.txt, and the corresponding ontology:SDFA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Zebrafish Anatomy (ZA) Ontology (SDZA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2ZA.txt, and the corresponding ontology:SDZA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Xenopus Anatomy (XA) Ontology (SDXA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2XA.txt, and the corresponding ontology:SDXA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Arabidopsis Plant Ontology (AP) Ontology (SDAP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2AP.txt, and the corresponding ontology:SDAP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Enzyme Commission (EC) Ontology (SDEC) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2EC.txt, and the corresponding ontology:SDEC.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain DrugBank ATC (DB) Ontology (SDDB) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DB.txt, and the corresponding ontology:SDDB.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB KeyWords (KW) Ontology (SDKW) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2KW.txt, and the corresponding ontology:SDKW.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB UniPathway (UP) Ontology (SDUP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2UP.txt, and the corresponding ontology:SDUP.txt) and mysql tables (Domain2PO.sql.gz).
Supra-domain Phenotype Ontology and its Annotations
Although domain-centric annotations hold great promise in describing phenotypic nature of independent domains, most domains themselves may not just work alone. In multi-domain proteins, they may be combined together to form distinct domain architectures. The recombination of the existing domains is considered as one of major driving forces for phenotypic diversificaation. As an extension, we have also generated supra-domain phenotype ontology and its annotations. Compared to domain-centric phenotype ontology and annotations (SCOP domains at the Superfamily level and Family level), this version focuses on supra-domains and individual SCOP domains ONLY at the Superfamily level. Besides, in terms of individual superfamilies, their annotations from the domain-centric version may be different from those from supra-domains version. Depending on your focus, the former should be used for the consideration of both the Superfamily level and Family level, otherwise the latter should be used if you are interested in domain combinations. Also, we provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Supra-domain Domain Disease Ontology (DO) Ontology (SPDO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DO.txt, and the corresponding ontology:SPDO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Human Phenotype (HP) Ontology (SPHO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2HP.txt, and the corresponding ontology:SPHO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Mouse Phenotype (MP) Ontology (SPMP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2MP.txt, and the corresponding ontology:SPMP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Worm Phenotype (WP) Ontology (SPWP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2WP.txt, and the corresponding ontology:SPWP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Yeast Phenotype (YP) Ontology (SPYP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2YP.txt, and the corresponding ontology:SPYP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Phenotype (FP) Ontology (SPFP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FP.txt, and the corresponding ontology:SPFP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Anatomy (FA) Ontology (SPFA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FA.txt, and the corresponding ontology:SPFA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Zebrafish Anatomy (ZA) Ontology (SPZA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2ZA.txt, and the corresponding ontology:SPZA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Xenopus Anatomy (XA) Ontology (SPXA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2XA.txt, and the corresponding ontology:SPXA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Arabidopsis Plant Ontology (AP) Ontology (SPAP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2AP.txt, and the corresponding ontology:SPAP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Enzyme Commission (EC) Ontology (SPEC) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2EC.txt, and the corresponding ontology:SPEC.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain DrugBank ATC (DB) Ontology (SPDB) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DB.txt, and the corresponding ontology:SPDB.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB KeyWords (KW) Ontology (SPKW) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2KW.txt, and the corresponding ontology:SPKW.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB UniPathway (UP) Ontology (SPUP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2UP.txt, and the corresponding ontology:SPUP.txt) and mysql tables (SP2PO.sql.gz).
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Superfamily(show details)
Superfamily domains annotated to this AP term (SDAP level: Least Informative)
Highlighted in gray are those with FDR_all>0.001
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| UROD/MetE-like | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Sec7 domain | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| V-type ATPase subunit E-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| PABC (PABP) domain | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| DLC | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Profilin (actin-binding protein) | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| ADC synthase | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| TK C-terminal domain-like | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| ARID-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Phospholipase A2, PLA2 | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Ricin B-like lectins | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| eEF-1beta-like | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Pentein | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| SufE/NifU | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| HAD-like | 0.002131 | INHERITED FROM: microgametophyte || pollen |
| NAD(P)-binding Rossmann-fold domains | 0.002333 | INHERITED FROM: pollen |
| Mitochondrial carrier | 0.002801 | INHERITED FROM: vascular bundle || pollen |
| ClpP/crotonase | 0.004132 | INHERITED FROM: plant embryo |
| Glutathione synthetase ATP-binding domain-like | 0.005276 | INHERITED FROM: plant embryo |
| Trimeric LpxA-like enzymes | 0.01152 | INHERITED FROM: portion of vascular tissue || companion cell || vascular system || phloem |
| UBC-like | 0.01656 | INHERITED FROM: pollen |
| RNA-binding domain, RBD | 0.02106 | INHERITED FROM: plant embryo || plant embryo axis |
| (Trans)glycosidases | 0.02612 | INHERITED FROM: plant spore |
| ALDH-like | 0.03194 | INHERITED FROM: microgametophyte || pollen |
| PH domain-like | 0.03634 | INHERITED FROM: pollen |
| ARM repeat | 0.03804 | INHERITED FROM: pollen |
| TPR-like | 0.04222 | INHERITED FROM: plant embryo |
| PP2C-like | 0.04972 | INHERITED FROM: microgametophyte || pollen |
| SRF-like | 0.05111 | INHERITED FROM: megagametophyte || plant zygote || antipodal cell || embryo sac |
| E set domains | 0.06154 | INHERITED FROM: microgametophyte || pollen |
| Calcium ATPase, transduction domain A | 0.06154 | INHERITED FROM: pollen |
| Calcium ATPase, transmembrane domain M | 0.06154 | INHERITED FROM: pollen |
| Formate/glycerate dehydrogenase catalytic domain-like | 0.08546 | INHERITED FROM: portion of vascular tissue || vascular bundle |
| Thioredoxin-like | 0.09809 | INHERITED FROM: microgametophyte || pollen || phloem |
| CheY-like | 0.116 | INHERITED FROM: shoot system vascular system || leaf vascular system || vascular system || phyllome vascular system |
| (Phosphotyrosine protein) phosphatases II | 0.1193 | INHERITED FROM: microgametophyte || pollen |
| Subtilisin-like | 0.1512 | INHERITED FROM: shoot system vascular system || leaf vascular system || vascular system || phyllome vascular system |
| Tubulin nucleotide-binding domain-like | 0.1936 | INHERITED FROM: portion of vascular tissue |
| GroES-like | 0.2131 | INHERITED FROM: portion of vascular tissue || vascular system |
| Tubulin C-terminal domain-like | 0.2609 | INHERITED FROM: portion of vascular tissue |
| HD-domain/PDEase-like | 0.2722 | INHERITED FROM: vascular system || root syncytium cell |
| Nucleotide-diphospho-sugar transferases | 0.3275 | INHERITED FROM: portion of vascular tissue || secondary xylem || vascular system || phloem |
| Cullin repeat-like | 0.4171 | INHERITED FROM: vascular system |
| Cupredoxins | 0.4539 | INHERITED FROM: shoot system vascular system || leaf vascular system || flower vascular system || cotyledon vascular system || petal vascular system || vascular system || embryo sac central cell || phyllome vascular system || sepal vascular system |
| RuBisCO, small subunit | 0.5671 | INHERITED FROM: portion of vascular tissue || shoot system vascular system || vascular bundle || shoot axis vascular system || vascular system |
| Chlorophyll a-b binding protein | 0.6623 | INHERITED FROM: shoot system vascular system || shoot axis vascular system || plant embryo axis || vascular system |
| Aquaporin-like | 0.6623 | INHERITED FROM: portion of vascular tissue || vascular system |
| MFS general substrate transporter | 0.8553 | INHERITED FROM: portion of vascular tissue || vascular system || phyllome vascular system |
| ABC transporter transmembrane region | 0.9032 | INHERITED FROM: vascular bundle |
| NAC domain | 0.9511 | INHERITED FROM: portion of vascular tissue || xylem || shoot system vascular system || vascular system |
| Clavaminate synthase-like | 1 | INHERITED FROM: flower vascular system |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | INHERITED FROM: cotyledon vascular system || vascular system |
| FAD-binding/transporter-associated domain-like | 1 | INHERITED FROM: megagametophyte || egg apparatus || embryo sac |
| GST C-terminal domain-like | 1 | INHERITED FROM: portion of vascular tissue || phloem |
| POZ domain | 1 | INHERITED FROM: embryo vascular system |
| Homeodomain-like | 1 | INHERITED FROM: portion of vascular tissue || xylem || embryo basal cell || protoxylem || shoot system vascular system || leaf vascular system || suspensor || vascular system || phyllome vascular system |
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| SH3-domain | 0 | Direct |
| Caspase-like | 0 | Direct |
| RraA-like | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 0 | Direct |
| Lipocalins | 0 | Direct |
| LysM domain | 0 | Direct |
| Granulin repeat | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| UROD/MetE-like | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Sec7 domain | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| V-type ATPase subunit E-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Chelatase | 0 | Direct |
| FKBP-like | 0 | Direct |
| PABC (PABP) domain | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| DLC | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| NAP-like | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Profilin (actin-binding protein) | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| BolA-like | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| ADC synthase | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| TK C-terminal domain-like | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| FF domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
| GlnB-like | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| FAH | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| ARID-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Phospholipase A2, PLA2 | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| LanC-like | 0 | Direct |
| AlbA-like | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Flavoproteins | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Cytochrome c | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| Ricin B-like lectins | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| SAP domain | 0 | Direct |
| R3H domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| SMR domain-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| DNA clamp | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| eEF-1beta-like | 0 | Direct |
| SIS domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| ADC-like | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Tim10-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| RibA-like | 0 | Direct |
| Pentein | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| NHL repeat | 0 | Direct |
| SufE/NifU | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Globin-like | 0 | Direct |
| HAD-like | 0.002131 | Inherited |
| NAD(P)-binding Rossmann-fold domains | 0.002333 | Inherited |
| Mitochondrial carrier | 0.002801 | Inherited |
| ClpP/crotonase | 0.004132 | Inherited |
| Glutathione synthetase ATP-binding domain-like | 0.005276 | Inherited |
| Trimeric LpxA-like enzymes | 0.01152 | Inherited |
| UBC-like | 0.01656 | Inherited |
| RNA-binding domain, RBD | 0.02106 | Inherited |
| (Trans)glycosidases | 0.02612 | Inherited |
| ALDH-like | 0.03194 | Inherited |
| PH domain-like | 0.03634 | Inherited |
| ARM repeat | 0.03804 | Inherited |
| TPR-like | 0.04222 | Inherited |
| PP2C-like | 0.04972 | Inherited |
| SRF-like | 0.05111 | Inherited |
| E set domains | 0.06154 | Inherited |
| Calcium ATPase, transduction domain A | 0.06154 | Inherited |
| Calcium ATPase, transmembrane domain M | 0.06154 | Inherited |
| Formate/glycerate dehydrogenase catalytic domain-like | 0.08546 | Inherited |
| Thioredoxin-like | 0.09809 | Inherited |
| CheY-like | 0.116 | Inherited |
| (Phosphotyrosine protein) phosphatases II | 0.1193 | Inherited |
| Subtilisin-like | 0.1512 | Inherited |
| Tubulin nucleotide-binding domain-like | 0.1936 | Inherited |
| GroES-like | 0.2131 | Inherited |
| Tubulin C-terminal domain-like | 0.2609 | Inherited |
| HD-domain/PDEase-like | 0.2722 | Inherited |
| Nucleotide-diphospho-sugar transferases | 0.3275 | Inherited |
| Cullin repeat-like | 0.4171 | Inherited |
| Cupredoxins | 0.4539 | Inherited |
| RuBisCO, small subunit | 0.5671 | Inherited |
| Chlorophyll a-b binding protein | 0.6623 | Inherited |
| Aquaporin-like | 0.6623 | Inherited |
| MFS general substrate transporter | 0.8553 | Inherited |
| ABC transporter transmembrane region | 0.9032 | Inherited |
| NAC domain | 0.9511 | Inherited |
| Clavaminate synthase-like | 1 | Inherited |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | Inherited |
| FAD-binding/transporter-associated domain-like | 1 | Inherited |
| GST C-terminal domain-like | 1 | Inherited |
| POZ domain | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Family(show details)
Family domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| GroEL-like chaperone, apical domain | 0 | DIRECT |
| DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Glycosyl hydrolases family 32 C-terminal domain | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Plant lipoxigenases | 0 | DIRECT |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
| Lipoxigenase N-terminal domain | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Glycerol-3-phosphate dehydrogenase | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| LIM domain | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Macro domain | 0 | DIRECT |
| Aminomethyltransferase folate-binding domain | 0 | DIRECT |
| Sigma4 domain | 0 | DIRECT |
| Pathogenesis-related protein 10 (PR10)-like | 0 | DIRECT |
| Phosphoenolpyruvate carboxylase | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
| Allosteric chorismate mutase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| G domain-linked domain | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| (Glycosyl)asparaginase | 0 | DIRECT |
| Spermidine synthase | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| MPP-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Homoserine dehydrogenase-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| Glycosyl hydrolases family 35 catalytic domain | 0 | DIRECT |
| HAT/Suf repeat | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| E2F dimerization segment | 0 | DIRECT |
| V-type ATPase subunit E | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Serine acetyltransferase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| beta-Phosphoglucomutase-like | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ZZ domain | 0 | DIRECT |
| Tetramerization domain of potassium channels | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Poly A polymerase head domain-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| PDI-like | 0 | DIRECT |
| glucose-1-phosphate thymidylyltransferase | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| La domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
| GAF domain | 0 | DIRECT |
| PaaI/YdiI-like | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
| L23p | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| MioX-like | 0 | DIRECT |
| Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | DIRECT |
| Gtf glycosyltransferase | 0 | DIRECT |
| Starch-binding domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Ferritin | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | DIRECT |
| AlkB-like | 0 | DIRECT |
| Hypothetical protein HI1317 | 0 | DIRECT |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
| DLC | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Putative glucosidase YicI, domain 3 | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| rRNA adenine dimethylase-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Glucose 6-phosphate dehydrogenase-like | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| SWIRM domain | 0 | DIRECT |
| NOL1/NOP2/sun | 0 | DIRECT |
| Subtilase propeptides/inhibitors | 0 | DIRECT |
| RNA-polymerase beta-prime | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Mo25 protein | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| Nuclear movement domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Ribonuclease H | 0 | DIRECT |
| Steroid-binding domain | 0 | DIRECT |
| Flavin-binding PAS domain | 0 | DIRECT |
| Vertebrate phospholipase A2 | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| Chromo barrel domain | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Anticodon-binding domain | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| BAR domain | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| DNA polymerase processivity factor | 0 | DIRECT |
| Arginine methyltransferase | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| LON domain-like | 0 | DIRECT |
| Rubredoxin | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | DIRECT |
| ATP sulfurylase N-terminal domain | 0 | DIRECT |
| Glutamine synthetase catalytic domain | 0 | DIRECT |
| MIF-related | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| beta-N-acetylhexosaminidase catalytic domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Smr domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| SerA intervening domain-like | 0 | DIRECT |
| Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
| Receiver domain of the ethylene receptor | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Cobalamin-independent methionine synthase | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| RNA methyltransferase FtsJ | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Gelsolin-like | 0 | DIRECT |
| MYND zinc finger | 0 | DIRECT |
| Poly(A) polymerase, PAP, middle domain | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Cell cycle transcription factor e2f-dp | 0 | DIRECT |
| Acyl-ACP thioesterase-like | 0 | DIRECT |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Trehalose-6-phosphate synthase, OtsA | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Dihydrodipicolinate reductase-like | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | DIRECT |
| Enolase | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| RNase Z-like | 0 | DIRECT |
| Cyclin A/CDK2-associated p19, Skp2 | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | DIRECT |
| Sec7 domain | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Phosphorelay protein-like | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Tail specific protease, catalytic domain | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| Galactosyltransferase LgtC | 0 | DIRECT |
| RelA/SpoT domain | 0 | DIRECT |
| eEF-1beta-like | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| GroES | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| YicI catalytic domain-like | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| monodomain cytochrome c | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 0 | DIRECT |
| GroEL-like chaperone, intermediate domain | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| Gastric lipase | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Profilin (actin-binding protein) | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| ARID domain | 0 | DIRECT |
| Hsp90 middle domain | 0 | DIRECT |
| N-type ATP pyrophosphatases | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| Prolyl oligopeptidase, C-terminal domain | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | DIRECT |
| Thiolase-related | 0 | DIRECT |
| Shikimate kinase (AroK) | 0 | DIRECT |
| GlmU C-terminal domain-like | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| Poly(A) polymerase, PAP, N-terminal domain | 0 | DIRECT |
| Eukaryotic type heme oxygenase | 0 | DIRECT |
| Exostosin | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Histidine kinase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Ribosomal protein L3 | 0 | DIRECT |
| Plant transcriptional regulator PBF-2 | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Anti-sigma factor antagonist SpoIIaa | 0 | DIRECT |
| Transcription factor IIB (TFIIB), core domain | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Class I aldolase | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| FucT-like | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| 1,3-glucuronyltransferase | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| WrbA-like | 0 | DIRECT |
| NifU/IscU domain | 0 | DIRECT |
| GDI-like N domain | 0 | DIRECT |
| GroEL chaperone, ATPase domain | 0 | DIRECT |
| Hypothetical protein At2g34160 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| STAR domain | 0 | DIRECT |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | DIRECT |
| Phosphoribulokinase/pantothenate kinase | 0 | DIRECT |
| PhzC/PhzF-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| ATP sulfurylase catalytic domain | 0 | DIRECT |
| Cell cycle arrest protein BUB3 | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| N-acetyl-l-glutamate kinase | 0 | DIRECT |
| RhoGDI-like | 0 | DIRECT |
| HAL/PAL-like | 0 | DIRECT |
| Phytochrome-specific domain | 0 | DIRECT |
| Poly(A) polymerase, PAP, C-terminal domain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | DIRECT |
| Ribosomal protein L37e | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| SufE-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| TRM1-like | 0 | DIRECT |
| Pentapeptide repeats | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| FKBP immunophilin/proline isomerase | 0 | DIRECT |
| ADC synthase | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Malic enzyme N-domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain | 0 | DIRECT |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| eIF5a N-terminal domain-like | 0 | DIRECT |
| Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
| PABC (PABP) domain | 0 | DIRECT |
| Protein prenyltransferases | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| Tandem AAA-ATPase domain | 0.00004503 | DIRECT |
| G proteins | 0.0001658 | DIRECT |
| Motor proteins | 0.0009108 | DIRECT |
| Mitochondrial carrier | 0.004174 | INHERITED FROM: vascular bundle || pollen |
| Amylase, catalytic domain | 0.004182 | INHERITED FROM: plant embryo |
| UBC-related | 0.00738 | INHERITED FROM: pollen |
| Canonical RBD | 0.007784 | INHERITED FROM: plant embryo || plant embryo axis |
| PP2C-like | 0.01509 | INHERITED FROM: microgametophyte || pollen |
| Glycosyl transferases group 1 | 0.02676 | INHERITED FROM: shoot system vascular system || leaf vascular system || cotyledon vascular system || phyllome vascular system |
| ALDH-like | 0.04025 | INHERITED FROM: microgametophyte || pollen |
| Homeodomain | 0.05679 | INHERITED FROM: portion of vascular tissue || vascular system |
| SRF-like | 0.06372 | INHERITED FROM: megagametophyte || plant zygote || antipodal cell || embryo sac |
| Calcium ATPase, transduction domain A | 0.07921 | INHERITED FROM: pollen |
| Formate/glycerate dehydrogenases, NAD-domain | 0.1053 | INHERITED FROM: portion of vascular tissue || vascular bundle |
| Subtilases | 0.1662 | INHERITED FROM: shoot system vascular system || leaf vascular system || vascular system || phyllome vascular system || embryo sac |
| Tubulin, GTPase domain | 0.1991 | INHERITED FROM: portion of vascular tissue |
| Alcohol dehydrogenase-like, N-terminal domain | 0.2501 | INHERITED FROM: portion of vascular tissue || vascular system |
| Tubulin, C-terminal domain | 0.2664 | INHERITED FROM: portion of vascular tissue |
| Alcohol dehydrogenase-like, C-terminal domain | 0.3736 | INHERITED FROM: portion of vascular tissue || vascular system |
| Exocyst complex component | 0.4514 | INHERITED FROM: root vascular system |
| Multidomain cupredoxins | 0.4729 | INHERITED FROM: shoot system vascular system || leaf vascular system || flower vascular system || cotyledon vascular system || petal vascular system || vascular system || phyllome vascular system || sepal vascular system |
| GARP response regulators | 0.5543 | INHERITED FROM: shoot system vascular system || leaf vascular system || vascular system || phloem || phyllome vascular system |
| Plastocyanin/azurin-like | 0.6335 | INHERITED FROM: embryo sac central cell |
| Aquaporin-like | 0.6892 | INHERITED FROM: portion of vascular tissue |
| CheY-related | 0.7216 | INHERITED FROM: shoot system vascular system || leaf vascular system || vascular system || phyllome vascular system |
| Chlorophyll a-b binding protein | 0.8997 | INHERITED FROM: shoot system vascular system || shoot axis vascular system || plant embryo axis || vascular system |
| ABC transporter transmembrane region | 0.9016 | INHERITED FROM: vascular bundle |
| U-box | 0.9525 | INHERITED FROM: cotyledon vascular system |
| NAC domain | 0.9884 | INHERITED FROM: portion of vascular tissue || xylem || shoot system vascular system || vascular system |
| Myb/SANT domain | 1 | INHERITED FROM: portion of vascular tissue || xylem || protoxylem || vascular system |
| Plant lipid-transfer and hydrophobic proteins | 1 | INHERITED FROM: cotyledon vascular system |
| BTB/POZ domain | 1 | INHERITED FROM: embryo vascular system |
| Glutathione S-transferase (GST), N-terminal domain | 1 | INHERITED FROM: portion of vascular tissue || phloem |
| Glutathione S-transferase (GST), C-terminal domain | 1 | INHERITED FROM: phloem |
| Penicillin synthase-like | 1 | INHERITED FROM: flower vascular system |
| FAD-linked oxidases, N-terminal domain | 1 | INHERITED FROM: megagametophyte || embryo sac |
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| GroEL-like chaperone, apical domain | 0 | Direct |
| DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| Glycosyl hydrolases family 32 C-terminal domain | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Plant lipoxigenases | 0 | Direct |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
| Lipoxigenase N-terminal domain | 0 | Direct |
| DNase I-like | 0 | Direct |
| Glycerol-3-phosphate dehydrogenase | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| LIM domain | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Macro domain | 0 | Direct |
| Aminomethyltransferase folate-binding domain | 0 | Direct |
| Sigma4 domain | 0 | Direct |
| Pathogenesis-related protein 10 (PR10)-like | 0 | Direct |
| Phosphoenolpyruvate carboxylase | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
| Allosteric chorismate mutase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| G domain-linked domain | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| (Glycosyl)asparaginase | 0 | Direct |
| Spermidine synthase | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| MPP-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Homoserine dehydrogenase-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| Glycosyl hydrolases family 35 catalytic domain | 0 | Direct |
| HAT/Suf repeat | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Reductases | 0 | Direct |
| E2F dimerization segment | 0 | Direct |
| V-type ATPase subunit E | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Serine acetyltransferase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Rps19E-like | 0 | Direct |
| beta-Phosphoglucomutase-like | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ZZ domain | 0 | Direct |
| Tetramerization domain of potassium channels | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| GABARAP-like | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Poly A polymerase head domain-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| PDI-like | 0 | Direct |
| glucose-1-phosphate thymidylyltransferase | 0 | Direct |
| HesB-like domain | 0 | Direct |
| La domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
| GAF domain | 0 | Direct |
| PaaI/YdiI-like | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
| L23p | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| MioX-like | 0 | Direct |
| Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | Direct |
| Gtf glycosyltransferase | 0 | Direct |
| Starch-binding domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Ferritin | 0 | Direct |
| Myf domain | 0 | Direct |
| FAH | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | Direct |
| AlkB-like | 0 | Direct |
| Hypothetical protein HI1317 | 0 | Direct |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
| DLC | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Putative glucosidase YicI, domain 3 | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| rRNA adenine dimethylase-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| LysM domain | 0 | Direct |
| Glucose 6-phosphate dehydrogenase-like | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| SWIRM domain | 0 | Direct |
| NOL1/NOP2/sun | 0 | Direct |
| Subtilase propeptides/inhibitors | 0 | Direct |
| RNA-polymerase beta-prime | 0 | Direct |
| R3H domain | 0 | Direct |
| Mo25 protein | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| Nuclear movement domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Ribonuclease H | 0 | Direct |
| Steroid-binding domain | 0 | Direct |
| Flavin-binding PAS domain | 0 | Direct |
| Vertebrate phospholipase A2 | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| Chromo barrel domain | 0 | Direct |
| B56-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Anticodon-binding domain | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| BAR domain | 0 | Direct |
| RibA-like | 0 | Direct |
| DNA polymerase processivity factor | 0 | Direct |
| Arginine methyltransferase | 0 | Direct |
| Cystatins | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| LON domain-like | 0 | Direct |
| Rubredoxin | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | Direct |
| ATP sulfurylase N-terminal domain | 0 | Direct |
| Glutamine synthetase catalytic domain | 0 | Direct |
| MIF-related | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| beta-N-acetylhexosaminidase catalytic domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Smr domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| SerA intervening domain-like | 0 | Direct |
| Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
| Receiver domain of the ethylene receptor | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Cobalamin-independent methionine synthase | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| RNA methyltransferase FtsJ | 0 | Direct |
| Choline kinase | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Gelsolin-like | 0 | Direct |
| MYND zinc finger | 0 | Direct |
| Poly(A) polymerase, PAP, middle domain | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Cell cycle transcription factor e2f-dp | 0 | Direct |
| Acyl-ACP thioesterase-like | 0 | Direct |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Trehalose-6-phosphate synthase, OtsA | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Dihydrodipicolinate reductase-like | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | Direct |
| Enolase | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| RNase Z-like | 0 | Direct |
| Cyclin A/CDK2-associated p19, Skp2 | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | Direct |
| Sec7 domain | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Phosphorelay protein-like | 0 | Direct |
| SAP domain | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Tail specific protease, catalytic domain | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| Galactosyltransferase LgtC | 0 | Direct |
| RelA/SpoT domain | 0 | Direct |
| eEF-1beta-like | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| GroES | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| YicI catalytic domain-like | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| monodomain cytochrome c | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 0 | Direct |
| GroEL-like chaperone, intermediate domain | 0 | Direct |
| Granulin repeat | 0 | Direct |
| LEA14-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| Gastric lipase | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Profilin (actin-binding protein) | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| ARID domain | 0 | Direct |
| Hsp90 middle domain | 0 | Direct |
| N-type ATP pyrophosphatases | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| Prolyl oligopeptidase, C-terminal domain | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | Direct |
| Thiolase-related | 0 | Direct |
| Shikimate kinase (AroK) | 0 | Direct |
| GlmU C-terminal domain-like | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| Poly(A) polymerase, PAP, N-terminal domain | 0 | Direct |
| Eukaryotic type heme oxygenase | 0 | Direct |
| Exostosin | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Histidine kinase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Ribosomal protein L3 | 0 | Direct |
| Plant transcriptional regulator PBF-2 | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| NHL repeat | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| CAT-like | 0 | Direct |
| Anti-sigma factor antagonist SpoIIaa | 0 | Direct |
| Transcription factor IIB (TFIIB), core domain | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Class I aldolase | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| FucT-like | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| 1,3-glucuronyltransferase | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| WrbA-like | 0 | Direct |
| NifU/IscU domain | 0 | Direct |
| GDI-like N domain | 0 | Direct |
| GroEL chaperone, ATPase domain | 0 | Direct |
| Hypothetical protein At2g34160 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| eIF1-like | 0 | Direct |
| STAR domain | 0 | Direct |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | Direct |
| Phosphoribulokinase/pantothenate kinase | 0 | Direct |
| PhzC/PhzF-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| ATP sulfurylase catalytic domain | 0 | Direct |
| Cell cycle arrest protein BUB3 | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| N-acetyl-l-glutamate kinase | 0 | Direct |
| RhoGDI-like | 0 | Direct |
| HAL/PAL-like | 0 | Direct |
| Phytochrome-specific domain | 0 | Direct |
| Poly(A) polymerase, PAP, C-terminal domain | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | Direct |
| Ribosomal protein L37e | 0 | Direct |
| EDF1-like | 0 | Direct |
| SufE-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| TRM1-like | 0 | Direct |
| Pentapeptide repeats | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| FKBP immunophilin/proline isomerase | 0 | Direct |
| ADC synthase | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Malic enzyme N-domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain | 0 | Direct |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| eIF5a N-terminal domain-like | 0 | Direct |
| Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
| PABC (PABP) domain | 0 | Direct |
| Protein prenyltransferases | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
| Tandem AAA-ATPase domain | 0.00004503 | Direct |
| G proteins | 0.0001658 | Direct |
| Motor proteins | 0.0009108 | Direct |
| Mitochondrial carrier | 0.004174 | Inherited |
| Amylase, catalytic domain | 0.004182 | Inherited |
| UBC-related | 0.00738 | Inherited |
| Canonical RBD | 0.007784 | Inherited |
| PP2C-like | 0.01509 | Inherited |
| Glycosyl transferases group 1 | 0.02676 | Inherited |
| ALDH-like | 0.04025 | Inherited |
| Homeodomain | 0.05679 | Inherited |
| SRF-like | 0.06372 | Inherited |
| Calcium ATPase, transduction domain A | 0.07921 | Inherited |
| Formate/glycerate dehydrogenases, NAD-domain | 0.1053 | Inherited |
| Subtilases | 0.1662 | Inherited |
| Tubulin, GTPase domain | 0.1991 | Inherited |
| Alcohol dehydrogenase-like, N-terminal domain | 0.2501 | Inherited |
| Tubulin, C-terminal domain | 0.2664 | Inherited |
| Alcohol dehydrogenase-like, C-terminal domain | 0.3736 | Inherited |
| Exocyst complex component | 0.4514 | Inherited |
| Multidomain cupredoxins | 0.4729 | Inherited |
| GARP response regulators | 0.5543 | Inherited |
| Plastocyanin/azurin-like | 0.6335 | Inherited |
| Aquaporin-like | 0.6892 | Inherited |
| CheY-related | 0.7216 | Inherited |
| Chlorophyll a-b binding protein | 0.8997 | Inherited |
| ABC transporter transmembrane region | 0.9016 | Inherited |
| U-box | 0.9525 | Inherited |
| NAC domain | 0.9884 | Inherited |
| Myb/SANT domain | 1 | Inherited |
| Plant lipid-transfer and hydrophobic proteins | 1 | Inherited |
| BTB/POZ domain | 1 | Inherited |
| Glutathione S-transferase (GST), N-terminal domain | 1 | Inherited |
| Glutathione S-transferase (GST), C-terminal domain | 1 | Inherited |
| Penicillin synthase-like | 1 | Inherited |
| FAD-linked oxidases, N-terminal domain | 1 | Inherited |
Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
 |
Plot tree as:
| |
Download Newick format tree:
|
(show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Supra-domain (including individual superfamily)
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| FAH | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| V-type ATPase subunit E-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| PABC (PABP) domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Profilin (actin-binding protein) | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| ADC synthase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| Phospholipase A2, PLA2 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Sec7 domain | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| DLC | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| SufE/NifU | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
| eEF-1beta-like | 0 | DIRECT |
| ARID-like | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| TK C-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| UROD/MetE-like | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| Ricin B-like lectins | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| Pentein | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.0009902 | DIRECT |
| HAD-like | 0.001698 | INHERITED FROM: pollen || microgametophyte |
| NAD(P)-binding Rossmann-fold domains | 0.00186 | INHERITED FROM: pollen |
| Mitochondrial carrier | 0.002236 | INHERITED FROM: pollen || vascular bundle |
| ClpP/crotonase | 0.003311 | INHERITED FROM: plant embryo |
| Glutathione synthetase ATP-binding domain-like | 0.004238 | INHERITED FROM: plant embryo |
| Trimeric LpxA-like enzymes | 0.009354 | INHERITED FROM: vascular system || phloem || companion cell || portion of vascular tissue |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.01076 | INHERITED FROM: plant embryo |
| UBC-like | 0.01353 | INHERITED FROM: pollen |
| RNA-binding domain, RBD | 0.0173 | INHERITED FROM: plant embryo axis || plant embryo |
| (Trans)glycosidases | 0.02157 | INHERITED FROM: plant spore |
| ALDH-like | 0.02654 | INHERITED FROM: pollen || microgametophyte |
| PH domain-like | 0.03032 | INHERITED FROM: pollen |
| ARM repeat | 0.03176 | INHERITED FROM: pollen |
| TPR-like | 0.03536 | INHERITED FROM: plant embryo |
| PP2C-like | 0.04176 | INHERITED FROM: pollen || microgametophyte |
| SRF-like | 0.04298 | INHERITED FROM: megagametophyte || antipodal cell || plant zygote || embryo sac |
| E set domains | 0.05207 | INHERITED FROM: pollen || microgametophyte |
| Calcium ATPase, transmembrane domain M | 0.05207 | INHERITED FROM: pollen |
| Calcium ATPase, transduction domain A | 0.05207 | INHERITED FROM: pollen |
| Formate/glycerate dehydrogenase catalytic domain-like | 0.07341 | INHERITED FROM: vascular bundle || portion of vascular tissue |
| Thioredoxin-like | 0.08475 | INHERITED FROM: pollen || microgametophyte || phloem |
| CheY-like | 0.1011 | INHERITED FROM: phyllome vascular system || shoot system vascular system || vascular system || leaf vascular system |
| (Phosphotyrosine protein) phosphatases II | 0.1044 | INHERITED FROM: pollen || microgametophyte |
| Subtilisin-like | 0.1341 | INHERITED FROM: phyllome vascular system || shoot system vascular system || vascular system || embryo sac || leaf vascular system |
| Tubulin nucleotide-binding domain-like | 0.1739 | INHERITED FROM: portion of vascular tissue |
| GroES-like | 0.1926 | INHERITED FROM: vascular system || portion of vascular tissue |
| Tubulin C-terminal domain-like | 0.2386 | INHERITED FROM: portion of vascular tissue |
| HD-domain/PDEase-like | 0.2496 | INHERITED FROM: vascular system || root syncytium cell |
| Nucleotide-diphospho-sugar transferases | 0.3044 | INHERITED FROM: vascular system || phloem || secondary xylem || portion of vascular tissue |
| Cullin repeat-like | 0.3934 | INHERITED FROM: vascular system |
| Cupredoxins | 0.4301 | INHERITED FROM: phyllome vascular system || petal vascular system || shoot system vascular system || flower vascular system || sepal vascular system || vascular system || cotyledon vascular system || leaf vascular system || embryo sac central cell |
| EF-hand | 0.5226 | INHERITED FROM: pollen || microgametophyte |
| RuBisCO, small subunit | 0.5427 | INHERITED FROM: shoot axis vascular system || vascular bundle || shoot system vascular system || vascular system || portion of vascular tissue |
| Chlorophyll a-b binding protein | 0.6379 | INHERITED FROM: shoot axis vascular system || shoot system vascular system || plant embryo axis || vascular system |
| Aquaporin-like | 0.6379 | INHERITED FROM: vascular system || portion of vascular tissue |
| MFS general substrate transporter | 0.8356 | INHERITED FROM: phyllome vascular system || vascular system || portion of vascular tissue |
| ABC transporter transmembrane region | 0.8862 | INHERITED FROM: vascular bundle |
| NAC domain | 0.937 | INHERITED FROM: xylem || shoot system vascular system || vascular system || portion of vascular tissue |
| GST C-terminal domain-like | 1 | INHERITED FROM: phloem || portion of vascular tissue |
| Homeodomain-like | 1 | INHERITED FROM: embryo basal cell || phyllome vascular system || xylem || shoot system vascular system || protoxylem || vascular system || suspensor || leaf vascular system || portion of vascular tissue |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | INHERITED FROM: vascular system || cotyledon vascular system |
| Clavaminate synthase-like | 1 | INHERITED FROM: flower vascular system |
| FAD-binding/transporter-associated domain-like | 1 | INHERITED FROM: megagametophyte || egg apparatus || embryo sac |
| POZ domain | 1 | INHERITED FROM: embryo vascular system |
| Mannose-binding lectins | 1 | INHERITED FROM: portion of vascular tissue |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| FAH | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| BolA-like | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Lipocalins | 0 | Direct |
| V-type ATPase subunit E-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| AlbA-like | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| PABC (PABP) domain | 0 | Direct |
| FF domain | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| eIF1-like | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| FKBP-like | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Profilin (actin-binding protein) | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| ADC synthase | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| R3H domain | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Tim10-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| Phospholipase A2, PLA2 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Sec7 domain | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| NAP-like | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| DLC | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| SufE/NifU | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| RibA-like | 0 | Direct |
| NHL repeat | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
| eEF-1beta-like | 0 | Direct |
| ARID-like | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| Cytochrome c | 0 | Direct |
| Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| TK C-terminal domain-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| SMR domain-like | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Caspase-like | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| UROD/MetE-like | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| GlnB-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| ADC-like | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Chelatase | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| SAP domain | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| LysM domain | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| Ricin B-like lectins | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| DNA clamp | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Globin-like | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Granulin repeat | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| SH3-domain | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| Pentein | 0 | Direct |
| SIS domain | 0 | Direct |
| LanC-like | 0 | Direct |
| RraA-like | 0 | Direct |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.0009902 | Direct |
| HAD-like | 0.001698 | Inherited |
| NAD(P)-binding Rossmann-fold domains | 0.00186 | Inherited |
| Mitochondrial carrier | 0.002236 | Inherited |
| ClpP/crotonase | 0.003311 | Inherited |
| Glutathione synthetase ATP-binding domain-like | 0.004238 | Inherited |
| Trimeric LpxA-like enzymes | 0.009354 | Inherited |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.01076 | Inherited |
| UBC-like | 0.01353 | Inherited |
| RNA-binding domain, RBD | 0.0173 | Inherited |
| (Trans)glycosidases | 0.02157 | Inherited |
| ALDH-like | 0.02654 | Inherited |
| PH domain-like | 0.03032 | Inherited |
| ARM repeat | 0.03176 | Inherited |
| TPR-like | 0.03536 | Inherited |
| PP2C-like | 0.04176 | Inherited |
| SRF-like | 0.04298 | Inherited |
| E set domains | 0.05207 | Inherited |
| Calcium ATPase, transmembrane domain M | 0.05207 | Inherited |
| Calcium ATPase, transduction domain A | 0.05207 | Inherited |
| Formate/glycerate dehydrogenase catalytic domain-like | 0.07341 | Inherited |
| Thioredoxin-like | 0.08475 | Inherited |
| CheY-like | 0.1011 | Inherited |
| (Phosphotyrosine protein) phosphatases II | 0.1044 | Inherited |
| Subtilisin-like | 0.1341 | Inherited |
| Tubulin nucleotide-binding domain-like | 0.1739 | Inherited |
| GroES-like | 0.1926 | Inherited |
| Tubulin C-terminal domain-like | 0.2386 | Inherited |
| HD-domain/PDEase-like | 0.2496 | Inherited |
| Nucleotide-diphospho-sugar transferases | 0.3044 | Inherited |
| Cullin repeat-like | 0.3934 | Inherited |
| Cupredoxins | 0.4301 | Inherited |
| EF-hand | 0.5226 | Inherited |
| RuBisCO, small subunit | 0.5427 | Inherited |
| Chlorophyll a-b binding protein | 0.6379 | Inherited |
| Aquaporin-like | 0.6379 | Inherited |
| MFS general substrate transporter | 0.8356 | Inherited |
| ABC transporter transmembrane region | 0.8862 | Inherited |
| NAC domain | 0.937 | Inherited |
| GST C-terminal domain-like | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | Inherited |
| Clavaminate synthase-like | 1 | Inherited |
| FAD-binding/transporter-associated domain-like | 1 | Inherited |
| POZ domain | 1 | Inherited |
| Mannose-binding lectins | 1 | Inherited |
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | DIRECT |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | DIRECT |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
54695,50978
54695 - POZ domain
50978 - WD40 repeat-like | 0 | DIRECT |
56235,53271
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
53271 - PRTase-like | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | DIRECT |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
81631,55003
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | DIRECT |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
54368,55931
54368 - Glutamine synthetase, N-terminal domain
55931 - Glutamine synthetase/guanido kinase | 0 | DIRECT |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
48403,56112
48403 - Ankyrin repeat
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52540,53271
52540 - P-loop containing nucleoside triphosphate hydrolases
53271 - PRTase-like | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,47473
52540 - P-loop containing nucleoside triphosphate hydrolases
47473 - EF-hand | 0 | DIRECT |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | DIRECT |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | DIRECT |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | DIRECT |
48371,56112
48371 - ARM repeat
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
47592,159042
47592 - SWIB/MDM2 domain
159042 - Plus3-like | 0 | DIRECT |
54001,57277
54001 - Cysteine proteinases
57277 - Granulin repeat | 0 | DIRECT |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,140990
52540 - P-loop containing nucleoside triphosphate hydrolases
140990 - FtsH protease domain-like | 0 | DIRECT |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | DIRECT |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | DIRECT |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | DIRECT |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
57783,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like | 0 | DIRECT |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | DIRECT |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | DIRECT |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
74650,51445
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases | 0 | DIRECT |
55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | DIRECT |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | DIRECT |
90229,50978
90229 - CCCH zinc finger
50978 - WD40 repeat-like | 0 | DIRECT |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | DIRECT |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | DIRECT |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
51726,51726
51726 - UROD/MetE-like
51726 - UROD/MetE-like | 0 | DIRECT |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
51445,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like | 0 | DIRECT |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | DIRECT |
55785,81383
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain | 0 | DIRECT |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | DIRECT |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
49785,49785
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
51695,51695
51695 - PLC-like phosphodiesterases
51695 - PLC-like phosphodiesterases | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | DIRECT |
50677,52374
50677 - ValRS/IleRS/LeuRS editing domain
52374 - Nucleotidylyl transferase | 0 | DIRECT |
54236,63491
54236 - Ubiquitin-like
63491 - BAG domain | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
57903,55729
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
52518,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
50985,57903
50985 - RCC1/BLIP-II
57903 - FYVE/PHD zinc finger | 0 | DIRECT |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | DIRECT |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | DIRECT |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
53448,51161
53448 - Nucleotide-diphospho-sugar transferases
51161 - Trimeric LpxA-like enzymes | 0 | DIRECT |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
100966,75689
100966 - Translation initiation factor 2 beta, aIF2beta, N-terminal domain
75689 - Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.01076 | INHERITED FROM: plant embryo |
56784,81665
56784 - HAD-like
81665 - Calcium ATPase, transmembrane domain M | 0.02513 | INHERITED FROM: pollen || microgametophyte |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 0.07087 | INHERITED FROM: pollen |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0.09416 | INHERITED FROM: vascular bundle || portion of vascular tissue |
52490,55307
52490 - Tubulin nucleotide-binding domain-like
55307 - Tubulin C-terminal domain-like | 0.2386 | INHERITED FROM: portion of vascular tissue |
50129,51735
50129 - GroES-like
51735 - NAD(P)-binding Rossmann-fold domains | 0.3268 | INHERITED FROM: vascular system || portion of vascular tissue |
52172,46689
52172 - CheY-like
46689 - Homeodomain-like | 0.5364 | INHERITED FROM: phyllome vascular system || shoot system vascular system || vascular system || leaf vascular system |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 0.5444 | INHERITED FROM: phyllome vascular system || petal vascular system || shoot system vascular system || flower vascular system || sepal vascular system || vascular system || cotyledon vascular system || leaf vascular system |
90123,52540
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.7925 | INHERITED FROM: vascular bundle |
57850,48371
57850 - RING/U-box
48371 - ARM repeat | 0.824 | INHERITED FROM: cotyledon vascular system |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 1 | INHERITED FROM: vascular bundle |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 1 | INHERITED FROM: phloem || portion of vascular tissue |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | Direct |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | Direct |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
54695,50978
54695 - POZ domain
50978 - WD40 repeat-like | 0 | Direct |
56235,53271
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
53271 - PRTase-like | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | Direct |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
81631,55003
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | Direct |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
54368,55931
54368 - Glutamine synthetase, N-terminal domain
55931 - Glutamine synthetase/guanido kinase | 0 | Direct |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
48403,56112
48403 - Ankyrin repeat
56112 - Protein kinase-like (PK-like) | 0 | Direct |
52540,53271
52540 - P-loop containing nucleoside triphosphate hydrolases
53271 - PRTase-like | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,47473
52540 - P-loop containing nucleoside triphosphate hydrolases
47473 - EF-hand | 0 | Direct |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | Direct |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | Direct |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | Direct |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | Direct |
48371,56112
48371 - ARM repeat
56112 - Protein kinase-like (PK-like) | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
47592,159042
47592 - SWIB/MDM2 domain
159042 - Plus3-like | 0 | Direct |
54001,57277
54001 - Cysteine proteinases
57277 - Granulin repeat | 0 | Direct |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,140990
52540 - P-loop containing nucleoside triphosphate hydrolases
140990 - FtsH protease domain-like | 0 | Direct |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | Direct |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | Direct |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | Direct |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | Direct |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
57783,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like | 0 | Direct |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | Direct |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | Direct |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
74650,51445
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases | 0 | Direct |
55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | Direct |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | Direct |
90229,50978
90229 - CCCH zinc finger
50978 - WD40 repeat-like | 0 | Direct |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | Direct |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | Direct |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
51726,51726
51726 - UROD/MetE-like
51726 - UROD/MetE-like | 0 | Direct |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
51445,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like | 0 | Direct |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | Direct |
55785,81383
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain | 0 | Direct |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | Direct |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
49785,49785
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
51695,51695
51695 - PLC-like phosphodiesterases
51695 - PLC-like phosphodiesterases | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | Direct |
50677,52374
50677 - ValRS/IleRS/LeuRS editing domain
52374 - Nucleotidylyl transferase | 0 | Direct |
54236,63491
54236 - Ubiquitin-like
63491 - BAG domain | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
57903,55729
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
52518,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
50985,57903
50985 - RCC1/BLIP-II
57903 - FYVE/PHD zinc finger | 0 | Direct |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | Direct |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | Direct |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
53448,51161
53448 - Nucleotide-diphospho-sugar transferases
51161 - Trimeric LpxA-like enzymes | 0 | Direct |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
100966,75689
100966 - Translation initiation factor 2 beta, aIF2beta, N-terminal domain
75689 - Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.01076 | Inherited |
56784,81665
56784 - HAD-like
81665 - Calcium ATPase, transmembrane domain M | 0.02513 | Inherited |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 0.07087 | Inherited |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0.09416 | Inherited |
52490,55307
52490 - Tubulin nucleotide-binding domain-like
55307 - Tubulin C-terminal domain-like | 0.2386 | Inherited |
50129,51735
50129 - GroES-like
51735 - NAD(P)-binding Rossmann-fold domains | 0.3268 | Inherited |
52172,46689
52172 - CheY-like
46689 - Homeodomain-like | 0.5364 | Inherited |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 0.5444 | Inherited |
90123,52540
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.7925 | Inherited |
57850,48371
57850 - RING/U-box
48371 - ARM repeat | 0.824 | Inherited |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 1 | Inherited |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 1 | Inherited |
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
49562,49562,53300
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
53300 - vWA-like | 0 | DIRECT |
81383,117281,117281
81383 - F-box domain
117281 - Kelch motif
117281 - Kelch motif | 0 | DIRECT |
52540,47473,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55785,81383,117281
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain
117281 - Kelch motif | 0 | DIRECT |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
81301,81631,55003
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | DIRECT |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
52518,52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | DIRECT |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | DIRECT |
74650,51445,51011
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
57783,47954,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like
47954 - Cyclin-like | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
55753,55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0.9813 | INHERITED FROM: vascular bundle |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.9813 | INHERITED FROM: vascular bundle |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
49562,49562,53300
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
53300 - vWA-like | 0 | Direct |
81383,117281,117281
81383 - F-box domain
117281 - Kelch motif
117281 - Kelch motif | 0 | Direct |
52540,47473,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55785,81383,117281
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain
117281 - Kelch motif | 0 | Direct |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
81301,81631,55003
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | Direct |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | Direct |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
52518,52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | Direct |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | Direct |
74650,51445,51011
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
57783,47954,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like
47954 - Cyclin-like | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
55753,55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0.9813 | Inherited |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.9813 | Inherited |
Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
|
Plot tree as:
| |
Download Newick format tree:
|
(show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
