SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Plant ANatomical entity (PAN): fruit valve

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   cardinal part of multi-tissue plant structure [PO:0025498] <8>(185|291) (186|132|50)
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + 3:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + 2:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + 2:   cardinal organ part [PO:0025001] <61>(182|290) (183|132|50)
+ 1:   fruit [PO:0009001] <14>(29|36) (29|19|4)
+ 1:   valve [PO:0025228] <2>(3|3) (3|2|0)
0:   fruit valve [PO:0000033](3|3) (3|2|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000005586Direct
POZ domain0.00000001008Direct
Cupredoxins0.00002081Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.000000008955Direct
BTB/POZ domain0.00000001649Direct
Multidomain cupredoxins0.00001667Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000004317Direct
POZ domain0.000000007798Direct
Cupredoxins0.00001624Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0000000004317Direct
    49503,49503
  • 49503 - Cupredoxins
  • 49503 - Cupredoxins
  • 0.00001624Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)