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Plant structure DEvelopment stage (PDE): whole plant development stage
(show info)
Phenotype Ontology
Like Gene Ontology (GO), phenotypy ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Phenotype ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology (DO) DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology (HP) HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology (MP) MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology (WP) WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology (YP) Based on YP which is the major contributor to the Ascomycete phenotype ontology, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology (FP) FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology (FA) FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology (ZA) ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology (XA) XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology (AP) As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology (EC) Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- DrugBank ATC (DB) Ontology (DB) In the Anatomical Therapeutic Chemical (ATC) classification system, drugs are classified in groups at five different levels according to the organ or system (1st level, anatomical main group) on which they act and their therapeutic (2nd level, therapeutic subgroup), pharmacological (3rd level, pharmacological subgroup) and chemical properties (4th level, chemical subgroup; 5th level, chemical substance). Only drugs in DrugBank are considered.
- UniProtKB KeyWords (KW) Ontology (KW) Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- UniProtKB UniPathway (UP) Ontology (UP) UP is a fully manually curated resource for the representation and annotation of metabolic pathways, being used as controlled vocabulary for pathway annotation in UniProtKB.
Structural Domain Phenotype Ontology and its Annotations
Structural Classification of Proteins (SCOP) classifies evolutionary-related domains into Superfamily level and Family level. Using the phenotype ontologies above, we have generated the domain-centric phenotype annotations, and further identified those phenotype terms which are the most informative to annotate SCOP domains. Promisingly, domain-centric phenotypic annotations can serve as an alternative starting point to explore genotype-phenotype relationships. We provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Structural Domain Disease Ontology (DO) Ontology (SDDO) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DO.txt, and the corresponding ontology:SDDO.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Human Phenotype (HP) Ontology (SDHP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2HP.txt, and the corresponding ontology:SDHP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Mouse Phenotype (MP) Ontology (SDMP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2MP.txt, and the corresponding ontology:SDMP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Worm Phenotype (WP) Ontology (SDWP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2WP.txt, and the corresponding ontology:SDWP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Yeast Phenotype (YP) Ontology (SDYP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2YP.txt, and the corresponding ontology:SDYP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Phenotype (FP) Ontology (SDFP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FP.txt, and the corresponding ontology:SDFP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Anatomy (FA) Ontology (SDFA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FA.txt, and the corresponding ontology:SDFA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Zebrafish Anatomy (ZA) Ontology (SDZA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2ZA.txt, and the corresponding ontology:SDZA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Xenopus Anatomy (XA) Ontology (SDXA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2XA.txt, and the corresponding ontology:SDXA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Arabidopsis Plant Ontology (AP) Ontology (SDAP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2AP.txt, and the corresponding ontology:SDAP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Enzyme Commission (EC) Ontology (SDEC) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2EC.txt, and the corresponding ontology:SDEC.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain DrugBank ATC (DB) Ontology (SDDB) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DB.txt, and the corresponding ontology:SDDB.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB KeyWords (KW) Ontology (SDKW) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2KW.txt, and the corresponding ontology:SDKW.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB UniPathway (UP) Ontology (SDUP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2UP.txt, and the corresponding ontology:SDUP.txt) and mysql tables (Domain2PO.sql.gz).
Supra-domain Phenotype Ontology and its Annotations
Although domain-centric annotations hold great promise in describing phenotypic nature of independent domains, most domains themselves may not just work alone. In multi-domain proteins, they may be combined together to form distinct domain architectures. The recombination of the existing domains is considered as one of major driving forces for phenotypic diversificaation. As an extension, we have also generated supra-domain phenotype ontology and its annotations. Compared to domain-centric phenotype ontology and annotations (SCOP domains at the Superfamily level and Family level), this version focuses on supra-domains and individual SCOP domains ONLY at the Superfamily level. Besides, in terms of individual superfamilies, their annotations from the domain-centric version may be different from those from supra-domains version. Depending on your focus, the former should be used for the consideration of both the Superfamily level and Family level, otherwise the latter should be used if you are interested in domain combinations. Also, we provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Supra-domain Domain Disease Ontology (DO) Ontology (SPDO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DO.txt, and the corresponding ontology:SPDO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Human Phenotype (HP) Ontology (SPHO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2HP.txt, and the corresponding ontology:SPHO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Mouse Phenotype (MP) Ontology (SPMP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2MP.txt, and the corresponding ontology:SPMP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Worm Phenotype (WP) Ontology (SPWP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2WP.txt, and the corresponding ontology:SPWP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Yeast Phenotype (YP) Ontology (SPYP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2YP.txt, and the corresponding ontology:SPYP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Phenotype (FP) Ontology (SPFP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FP.txt, and the corresponding ontology:SPFP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Anatomy (FA) Ontology (SPFA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FA.txt, and the corresponding ontology:SPFA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Zebrafish Anatomy (ZA) Ontology (SPZA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2ZA.txt, and the corresponding ontology:SPZA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Xenopus Anatomy (XA) Ontology (SPXA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2XA.txt, and the corresponding ontology:SPXA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Arabidopsis Plant Ontology (AP) Ontology (SPAP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2AP.txt, and the corresponding ontology:SPAP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Enzyme Commission (EC) Ontology (SPEC) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2EC.txt, and the corresponding ontology:SPEC.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain DrugBank ATC (DB) Ontology (SPDB) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DB.txt, and the corresponding ontology:SPDB.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB KeyWords (KW) Ontology (SPKW) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2KW.txt, and the corresponding ontology:SPKW.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB UniPathway (UP) Ontology (SPUP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2UP.txt, and the corresponding ontology:SPUP.txt) and mysql tables (SP2PO.sql.gz).
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Superfamily(show details)
Superfamily domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Cysteine alpha-hairpin motif | 0 | DIRECT |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| At5g01610-like | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| DNA repair protein MutS, domain III | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
| NagB/RpiA/CoA transferase-like | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| PapD-like | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| EGF/Laminin | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| 2Fe-2S ferredoxin-like | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| STI-like | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Crambin-like | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| HCP-like | 0 | DIRECT |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| CHY zinc finger-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Sm-like ribonucleoproteins | 0 | DIRECT |
| Clc chloride channel | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| DLC | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Cyclophilin-like | 0 | DIRECT |
| Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| SMAD/FHA domain | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Arabinanase/levansucrase/invertase | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Saposin | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| NAD(P)-linked oxidoreductase | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| alpha-D-mannose-specific plant lectins | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Enolase C-terminal domain-like | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| TK C-terminal domain-like | 0 | DIRECT |
| Plus3-like | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| BEACH domain | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Macro domain-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| LDH C-terminal domain-like | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Ribosomal protein L25-like | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| RNase III domain-like | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| CRAL/TRIO domain | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| CO dehydrogenase ISP C-domain like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Preprotein translocase SecY subunit | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| ARID-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Carbon-nitrogen hydrolase | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| CRAL/TRIO N-terminal domain | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| PIN domain-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Trypsin-like serine proteases | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Probable bacterial effector-binding domain | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| DNA-glycosylase | 0 | DIRECT |
| dsRNA-binding domain-like | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Ricin B-like lectins | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| SBT domain | 0 | DIRECT |
| ATP-dependent DNA ligase DNA-binding domain | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| SAM/Pointed domain | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Carbohydrate phosphatase | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Molybdenum cofactor-binding domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| DHS-like NAD/FAD-binding domain | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| PAH2 domain | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| PDZ domain-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| Ribulose-phoshate binding barrel | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Undecaprenyl diphosphate synthase | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| BRCT domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Scorpion toxin-like | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Amine oxidase N-terminal region | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Ribonuclease Rh-like | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Aldolase | 0 | DIRECT |
| Phospholipase C/P1 nuclease | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| PAZ domain | 0 | DIRECT |
| Alkaline phosphatase-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| MCP/YpsA-like | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Ribosomal L27 protein-like | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| ClpS-like | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| Phosphoglycerate mutase-like | 0 | DIRECT |
| Restriction endonuclease-like | 0 | DIRECT |
| RNA-binding domain, RBD | 0.003015 | INHERITED FROM: leaf production stage || plant embryo stage || E expanded cotyledon stage || D bilateral stage || F mature embryo stage |
| TPR-like | 0.005496 | INHERITED FROM: plant embryo stage || E expanded cotyledon stage || 0 seed germination stage |
| ClpP/crotonase | 0.0735 | INHERITED FROM: F mature embryo stage |
| Bet v1-like | 0.07583 | INHERITED FROM: seedling development stage |
| Nucleic acid-binding proteins | 0.08352 | INHERITED FROM: E expanded cotyledon stage || sporophyte reproductive stage || whole plant inflorescence detectable stage |
| Nucleotidylyl transferase | 0.08961 | INHERITED FROM: D bilateral stage || F mature embryo stage |
| ACT-like | 0.1203 | INHERITED FROM: LP.06 six leaves visible stage || LP.12 twelve leaves visible stage || LP.10 ten leaves visible stage |
| WD40 repeat-like | 0.1418 | INHERITED FROM: E expanded cotyledon stage |
| NAD(P)-binding Rossmann-fold domains | 0.2421 | INHERITED FROM: LP.08 eight leaves visible stage || LP.06 six leaves visible stage |
| Thioredoxin-like | 0.2744 | INHERITED FROM: 1 main shoot growth stage || leaf production stage |
| Cupredoxins | 0.2803 | INHERITED FROM: seedling development stage |
| ARM repeat | 0.3573 | INHERITED FROM: D bilateral stage || F mature embryo stage |
| P-loop containing nucleoside triphosphate hydrolases | 0.3599 | INHERITED FROM: sporophyte reproductive stage |
| Class II aaRS ABD-related | 0.5098 | INHERITED FROM: 0 seed germination stage |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.5098 | INHERITED FROM: 0 seed germination stage |
| GAF domain-like | 0.5496 | INHERITED FROM: seedling development stage |
| Class II aaRS and biotin synthetases | 0.7576 | INHERITED FROM: 0 seed germination stage |
| DNA/RNA polymerases | 0.8526 | INHERITED FROM: 0 seed germination stage |
| Histone-fold | 0.9436 | INHERITED FROM: seedling development stage |
| alpha/beta-Hydrolases | 1 | INHERITED FROM: seed imbibition stage |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: seedling development stage |
| ABC transporter transmembrane region | 1 | INHERITED FROM: seedling development stage |
| Actin-like ATPase domain | 1 | INHERITED FROM: seedling development stage |
| Homeodomain-like | 1 | INHERITED FROM: seedling development stage |
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Cysteine alpha-hairpin motif | 0 | Direct |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| Caspase-like | 0 | Direct |
| RraA-like | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Lipocalins | 0 | Direct |
| LysM domain | 0 | Direct |
| At5g01610-like | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| DNA repair protein MutS, domain III | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| HMG-box | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
| NagB/RpiA/CoA transferase-like | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| PapD-like | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| EGF/Laminin | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| 2Fe-2S ferredoxin-like | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| STI-like | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Crambin-like | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Release factor | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| HCP-like | 0 | Direct |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | Direct |
| CHY zinc finger-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Chelatase | 0 | Direct |
| FKBP-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Sm-like ribonucleoproteins | 0 | Direct |
| Clc chloride channel | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| DLC | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Cyclophilin-like | 0 | Direct |
| Gamma-glutamyl cyclotransferase-like | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| SMAD/FHA domain | 0 | Direct |
| BolA-like | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Arabinanase/levansucrase/invertase | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| RL5-like | 0 | Direct |
| Saposin | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| ALDH-like | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| NAD(P)-linked oxidoreductase | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| alpha-D-mannose-specific plant lectins | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Enolase C-terminal domain-like | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| TK C-terminal domain-like | 0 | Direct |
| Plus3-like | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| BEACH domain | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Macro domain-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| LDH C-terminal domain-like | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Ribosomal protein L25-like | 0 | Direct |
| FF domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| RNase III domain-like | 0 | Direct |
| GlnB-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| LigT-like | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| CRAL/TRIO domain | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| L28p-like | 0 | Direct |
| Mss4-like | 0 | Direct |
| FAH | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| CO dehydrogenase ISP C-domain like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| WW domain | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Preprotein translocase SecY subunit | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| ARID-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Carbon-nitrogen hydrolase | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| LanC-like | 0 | Direct |
| AlbA-like | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| CRAL/TRIO N-terminal domain | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| PIN domain-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Trypsin-like serine proteases | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| Cytochrome c | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Probable bacterial effector-binding domain | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| DNA-glycosylase | 0 | Direct |
| dsRNA-binding domain-like | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| eIF1-like | 0 | Direct |
| Ricin B-like lectins | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| RplX-like | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| SBT domain | 0 | Direct |
| ATP-dependent DNA ligase DNA-binding domain | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| SAM/Pointed domain | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Carbohydrate phosphatase | 0 | Direct |
| AF1104-like | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| Formyltransferase | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| R3H domain | 0 | Direct |
| Molybdenum cofactor-binding domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| SMR domain-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| DHS-like NAD/FAD-binding domain | 0 | Direct |
| HRDC-like | 0 | Direct |
| YhbY-like | 0 | Direct |
| DNA clamp | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Prefoldin | 0 | Direct |
| PAH2 domain | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| PDZ domain-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Rhodanese/Cell cycle control phosphatase | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| Ribulose-phoshate binding barrel | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| TAZ domain | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Undecaprenyl diphosphate synthase | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| HIT-like | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| SIS domain | 0 | Direct |
| BRCT domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| ADC-like | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Scorpion toxin-like | 0 | Direct |
| Tim10-like | 0 | Direct |
| Amine oxidase N-terminal region | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Ribonuclease Rh-like | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| PX domain | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Aldolase | 0 | Direct |
| Phospholipase C/P1 nuclease | 0 | Direct |
| RibA-like | 0 | Direct |
| PAZ domain | 0 | Direct |
| Alkaline phosphatase-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| NHL repeat | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| MCP/YpsA-like | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Ribosomal L27 protein-like | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Globin-like | 0 | Direct |
| ClpS-like | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| Phosphoglycerate mutase-like | 0 | Direct |
| Restriction endonuclease-like | 0 | Direct |
| RNA-binding domain, RBD | 0.003015 | Inherited |
| TPR-like | 0.005496 | Inherited |
| ClpP/crotonase | 0.0735 | Inherited |
| Bet v1-like | 0.07583 | Inherited |
| Nucleic acid-binding proteins | 0.08352 | Inherited |
| Nucleotidylyl transferase | 0.08961 | Inherited |
| ACT-like | 0.1203 | Inherited |
| WD40 repeat-like | 0.1418 | Inherited |
| NAD(P)-binding Rossmann-fold domains | 0.2421 | Inherited |
| Thioredoxin-like | 0.2744 | Inherited |
| Cupredoxins | 0.2803 | Inherited |
| ARM repeat | 0.3573 | Inherited |
| P-loop containing nucleoside triphosphate hydrolases | 0.3599 | Inherited |
| Class II aaRS ABD-related | 0.5098 | Inherited |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.5098 | Inherited |
| GAF domain-like | 0.5496 | Inherited |
| Class II aaRS and biotin synthetases | 0.7576 | Inherited |
| DNA/RNA polymerases | 0.8526 | Inherited |
| Histone-fold | 0.9436 | Inherited |
| alpha/beta-Hydrolases | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| ABC transporter transmembrane region | 1 | Inherited |
| Actin-like ATPase domain | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Family(show details)
Family domains annotated to this AP term (Not in SDAP)
Highlighted in gray are those with FDR_all>0.001
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| GroEL-like chaperone, apical domain | 0 | DIRECT |
| DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Cystathionine synthase-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| IF2B-like | 0 | DIRECT |
| EF-G/eEF-2 domains III and V | 0 | DIRECT |
| Clathrin coat assembly domain | 0 | DIRECT |
| Cyclophilin (peptidylprolyl isomerase) | 0 | DIRECT |
| GAPDH-like | 0 | DIRECT |
| Glycosyl transferases group 1 | 0 | DIRECT |
| Glycosyl hydrolases family 32 C-terminal domain | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Plant lipoxigenases | 0 | DIRECT |
| Undecaprenyl diphosphate synthase | 0 | DIRECT |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
| Lipoxigenase N-terminal domain | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Glycerol-3-phosphate dehydrogenase | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| Mechanosensitive channel protein MscS (YggB), middle domain | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| LIM domain | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Macro domain | 0 | DIRECT |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | DIRECT |
| Aminomethyltransferase folate-binding domain | 0 | DIRECT |
| Sigma4 domain | 0 | DIRECT |
| CO dehydrogenase flavoprotein N-terminal domain-like | 0 | DIRECT |
| PAH2 domain | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | DIRECT |
| LeuD-like | 0 | DIRECT |
| Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
| Allosteric chorismate mutase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| G domain-linked domain | 0 | DIRECT |
| Crambin-like | 0 | DIRECT |
| T7 RNA polymerase | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NagB-like | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Adenain-like | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| (Glycosyl)asparaginase | 0 | DIRECT |
| RuBisCo LSMT catalytic domain | 0 | DIRECT |
| Spermidine synthase | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| HMGL-like | 0 | DIRECT |
| MPP-like | 0 | DIRECT |
| Hermes transposase-like | 0 | DIRECT |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | DIRECT |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | DIRECT |
| Molybdenum cofactor-binding domain | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | DIRECT |
| P1 nuclease | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Homoserine dehydrogenase-like | 0 | DIRECT |
| Aldose 1-epimerase (mutarotase) | 0 | DIRECT |
| Pyruvate oxidase and decarboxylase, middle domain | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| Glycosyl hydrolases family 35 catalytic domain | 0 | DIRECT |
| MSP-like | 0 | DIRECT |
| HAT/Suf repeat | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| E2F dimerization segment | 0 | DIRECT |
| CHY zinc finger | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| PWWP domain | 0 | DIRECT |
| Serine acetyltransferase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| SBT domain | 0 | DIRECT |
| beta-Phosphoglucomutase-like | 0 | DIRECT |
| HspBP1 domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ZZ domain | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| HCP-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| XPF/Rad1/Mus81 nuclease | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| Nitrogenase iron protein-like | 0 | DIRECT |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | DIRECT |
| 28-residue LRR | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| L30e/L7ae ribosomal proteins | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Poly A polymerase head domain-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| PyrH-like | 0 | DIRECT |
| Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| At5g01610-like | 0 | DIRECT |
| Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
| Single-domain sulfurtransferase | 0 | DIRECT |
| PDI-like | 0 | DIRECT |
| Band 7/SPFH domain | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| 3-Methyladenine DNA glycosylase I (Tag) | 0 | DIRECT |
| Swaposin | 0 | DIRECT |
| 5' to 3' exonuclease catalytic domain | 0 | DIRECT |
| La domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
| GAF domain | 0 | DIRECT |
| PaaI/YdiI-like | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
| L23p | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Tryptophan biosynthesis enzymes | 0 | DIRECT |
| Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | DIRECT |
| Ribosomal proteins L24p and L21e | 0 | DIRECT |
| Gtf glycosyltransferase | 0 | DIRECT |
| Starch-binding domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Ferritin | 0 | DIRECT |
| Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain | 0 | DIRECT |
| CRAL/TRIO domain | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Sm motif of small nuclear ribonucleoproteins, SNRNP | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| C5 cytosine-specific DNA methylase, DCM | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| AlkB-like | 0 | DIRECT |
| Ribosomal protein L18 and S11 | 0 | DIRECT |
| Hypothetical protein HI1317 | 0 | DIRECT |
| Carboxylesterase/thioesterase 1 | 0 | DIRECT |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
| DLC | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Putative glucosidase YicI, domain 3 | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| rRNA adenine dimethylase-like | 0 | DIRECT |
| Pyruvate oxidase and decarboxylase Pyr module | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Glucose 6-phosphate dehydrogenase-like | 0 | DIRECT |
| MoCo carrier protein-like | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| SWIRM domain | 0 | DIRECT |
| NOL1/NOP2/sun | 0 | DIRECT |
| Subtilase propeptides/inhibitors | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| SIAH, seven in absentia homolog | 0 | DIRECT |
| RNA-polymerase beta-prime | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| Nuclear movement domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Ribonuclease H | 0 | DIRECT |
| Glycerol-3-phosphate transporter | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Chromo barrel domain | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| Kunitz (STI) inhibitors | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Ribosomal S5 protein, N-terminal domain | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| BAR domain | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| DNA repair protein MutS, domain III | 0 | DIRECT |
| DNA polymerase processivity factor | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| C1-like domain | 0 | DIRECT |
| Amylase, catalytic domain | 0 | DIRECT |
| Arginine methyltransferase | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| RNase III catalytic domain-like | 0 | DIRECT |
| Diacylglycerol kinase-like | 0 | DIRECT |
| LON domain-like | 0 | DIRECT |
| Rubredoxin | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| ATP sulfurylase N-terminal domain | 0 | DIRECT |
| Glutamine synthetase catalytic domain | 0 | DIRECT |
| SAM (sterile alpha motif) domain | 0 | DIRECT |
| MIF-related | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| Glycosyl hydrolases family 32 N-terminal domain | 0 | DIRECT |
| PAZ domain | 0 | DIRECT |
| 2Fe-2S ferredoxin domains from multidomain proteins | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| beta-N-acetylhexosaminidase catalytic domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Smr domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| SerA intervening domain-like | 0 | DIRECT |
| Clc chloride channel | 0 | DIRECT |
| Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
| Ribosomal protein L5 | 0 | DIRECT |
| Hypothetical protein TM1112 | 0 | DIRECT |
| Receiver domain of the ethylene receptor | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| 4HBT-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| UBX domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Aspartokinase allosteric domain-like | 0 | DIRECT |
| RNA methyltransferase FtsJ | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Class II glutamine amidotransferases | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Amine oxidase N-terminal region | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase PP module | 0 | DIRECT |
| Prokaryotic proteases | 0 | DIRECT |
| Linker histone H1/H5 | 0 | DIRECT |
| MYND zinc finger | 0 | DIRECT |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
| Ribonuclease Rh-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Cell cycle transcription factor e2f-dp | 0 | DIRECT |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | DIRECT |
| Acyl-ACP thioesterase-like | 0 | DIRECT |
| HD domain | 0 | DIRECT |
| Lactate & malate dehydrogenases, C-terminal domain | 0 | DIRECT |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Plant defensins | 0 | DIRECT |
| Trehalose-6-phosphate synthase, OtsA | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| CAF1-like ribonuclease | 0 | DIRECT |
| ATP-dependent DNA ligase catalytic domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| Dihydrodipicolinate reductase-like | 0 | DIRECT |
| Phosphoenolpyruvate mutase/Isocitrate lyase-like | 0 | DIRECT |
| DJ-1/PfpI | 0 | DIRECT |
| GAT domain | 0 | DIRECT |
| Neurolysin-like | 0 | DIRECT |
| Pseudouridine synthase I TruA | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | DIRECT |
| Enolase | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| LplA-like | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| RNase Z-like | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| Cyclin A/CDK2-associated p19, Skp2 | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| CO dehydrogenase ISP C-domain like | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Phosphorelay protein-like | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Tail specific protease, catalytic domain | 0 | DIRECT |
| NifU C-terminal domain-like | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| Galactosyltransferase LgtC | 0 | DIRECT |
| RelA/SpoT domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| GroES | 0 | DIRECT |
| PsbP-like | 0 | DIRECT |
| CRAL/TRIO N-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Deoxycytidylate deaminase-like | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| YicI catalytic domain-like | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| PNP-oxidase like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| Type II chitinase | 0 | DIRECT |
| monodomain cytochrome c | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| PAPS sulfotransferase | 0 | DIRECT |
| GroEL-like chaperone, intermediate domain | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Ribosomal protein L19 | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| BEACH domain | 0 | DIRECT |
| Cytochrome b5 | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| ARID domain | 0 | DIRECT |
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 0 | DIRECT |
| N-type ATP pyrophosphatases | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| BSD domain | 0 | DIRECT |
| Thioesterases | 0 | DIRECT |
| Prolyl oligopeptidase, C-terminal domain | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | DIRECT |
| Dual specificity phosphatase-like | 0 | DIRECT |
| Thiolase-related | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Patatin | 0 | DIRECT |
| Shikimate kinase (AroK) | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| PA domain | 0 | DIRECT |
| Exostosin | 0 | DIRECT |
| Plus3 | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| Pyruvate oxidase and decarboxylase PP module | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | DIRECT |
| SelR domain | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Chromo domain | 0 | DIRECT |
| Histidine kinase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Ribosomal protein L3 | 0 | DIRECT |
| VHS domain | 0 | DIRECT |
| Pseudouridine synthase RsuA/RluD | 0 | DIRECT |
| Plant transcriptional regulator PBF-2 | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| alpha-D-mannose-specific plant lectins | 0 | DIRECT |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Anti-sigma factor antagonist SpoIIaa | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Class I aldolase | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| FucT-like | 0 | DIRECT |
| FHA domain | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| 1,3-glucuronyltransferase | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| Pyridoxal-dependent decarboxylase | 0 | DIRECT |
| Phosphoribosylpyrophosphate synthetase-like | 0 | DIRECT |
| MutT-like | 0 | DIRECT |
| WrbA-like | 0 | DIRECT |
| GDI-like N domain | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| GroEL chaperone, ATPase domain | 0 | DIRECT |
| Hypothetical protein At2g34160 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| BC ATP-binding domain-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| NLI interacting factor-like phosphatase | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| STAR domain | 0 | DIRECT |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| SOUL heme-binding protein | 0 | DIRECT |
| PhzC/PhzF-like | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Methyl-CpG-binding domain, MBD | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| ATP sulfurylase catalytic domain | 0 | DIRECT |
| Cell cycle arrest protein BUB3 | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| BC N-terminal domain-like | 0 | DIRECT |
| N-acetyl-l-glutamate kinase | 0 | DIRECT |
| RhoGDI-like | 0 | DIRECT |
| HAL/PAL-like | 0 | DIRECT |
| Phytochrome-specific domain | 0 | DIRECT |
| ATP-dependent DNA ligase DNA-binding domain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | DIRECT |
| Ribosomal protein L37e | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| SufE-like | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| TRM1-like | 0 | DIRECT |
| Pentapeptide repeats | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Cofactor-dependent phosphoglycerate mutase | 0 | DIRECT |
| FKBP immunophilin/proline isomerase | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Double-stranded RNA-binding domain (dsRBD) | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| BC C-terminal domain-like | 0 | DIRECT |
| Ubiquitin activating enzymes (UBA) | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme postcatalytic domain | 0 | DIRECT |
| Malic enzyme N-domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Aldo-keto reductases (NADP) | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain | 0 | DIRECT |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| Preprotein translocase SecY subunit | 0 | DIRECT |
| eIF5a N-terminal domain-like | 0 | DIRECT |
| Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
| ATP-dependent protease Lon (La), catalytic domain | 0 | DIRECT |
| LDH N-terminal domain-like | 0 | DIRECT |
| Protein prenyltransferases | 0 | DIRECT |
| RNA-polymerase beta | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| Ribosomal protein L7/12, C-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| Tandem AAA-ATPase domain | 0.00001885 | DIRECT |
| Canonical RBD | 0.0009481 | DIRECT |
| Homeodomain | 0.005402 | INHERITED FROM: seedling development stage |
| Cold shock DNA-binding domain-like | 0.02435 | INHERITED FROM: E expanded cotyledon stage || D bilateral stage || F mature embryo stage |
| Mitochondrial carrier | 0.04818 | INHERITED FROM: 0 seed germination stage |
| Multidomain cupredoxins | 0.06847 | INHERITED FROM: seedling development stage |
| WD40-repeat | 0.1288 | INHERITED FROM: plant embryo stage |
| PHD domain | 0.2334 | INHERITED FROM: E expanded cotyledon stage |
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0.2801 | INHERITED FROM: 0 seed germination stage |
| PP2C-like | 0.43 | INHERITED FROM: 0 seed germination stage |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.4876 | INHERITED FROM: 0 seed germination stage |
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain | 0.5449 | INHERITED FROM: 0 seed germination stage |
| Anticodon-binding domain of Class II aaRS | 0.684 | INHERITED FROM: 0 seed germination stage |
| DNA replication initiator (cdc21/cdc54) N-terminal domain | 0.7427 | INHERITED FROM: sporophyte reproductive stage || whole plant inflorescence detectable stage |
| Nucleosome core histones | 0.7595 | INHERITED FROM: seedling development stage |
| Inositol polyphosphate 5-phosphatase (IPP5) | 0.9364 | INHERITED FROM: seedling development stage |
| Actin/HSP70 | 1 | INHERITED FROM: seedling development stage |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: seedling development stage |
| Carboxylesterase | 1 | INHERITED FROM: seed imbibition stage || 0 seed germination stage |
| ABC transporter transmembrane region | 1 | INHERITED FROM: seedling development stage |
| SCOP term | FDR (all) | Annotation (direct or inherited) |
| GroEL-like chaperone, apical domain | 0 | Direct |
| DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Cystathionine synthase-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| IF2B-like | 0 | Direct |
| EF-G/eEF-2 domains III and V | 0 | Direct |
| Clathrin coat assembly domain | 0 | Direct |
| Cyclophilin (peptidylprolyl isomerase) | 0 | Direct |
| GAPDH-like | 0 | Direct |
| Glycosyl transferases group 1 | 0 | Direct |
| Glycosyl hydrolases family 32 C-terminal domain | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Plant lipoxigenases | 0 | Direct |
| Undecaprenyl diphosphate synthase | 0 | Direct |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
| Lipoxigenase N-terminal domain | 0 | Direct |
| DNase I-like | 0 | Direct |
| Glycerol-3-phosphate dehydrogenase | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| Mechanosensitive channel protein MscS (YggB), middle domain | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| LIM domain | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Macro domain | 0 | Direct |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | Direct |
| Aminomethyltransferase folate-binding domain | 0 | Direct |
| Sigma4 domain | 0 | Direct |
| CO dehydrogenase flavoprotein N-terminal domain-like | 0 | Direct |
| PAH2 domain | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | Direct |
| LeuD-like | 0 | Direct |
| Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
| Allosteric chorismate mutase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| G domain-linked domain | 0 | Direct |
| Crambin-like | 0 | Direct |
| T7 RNA polymerase | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NagB-like | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Adenain-like | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| (Glycosyl)asparaginase | 0 | Direct |
| RuBisCo LSMT catalytic domain | 0 | Direct |
| Spermidine synthase | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| HMGL-like | 0 | Direct |
| MPP-like | 0 | Direct |
| Hermes transposase-like | 0 | Direct |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | Direct |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | Direct |
| Molybdenum cofactor-binding domain | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | Direct |
| P1 nuclease | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Homoserine dehydrogenase-like | 0 | Direct |
| Aldose 1-epimerase (mutarotase) | 0 | Direct |
| Pyruvate oxidase and decarboxylase, middle domain | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| Glycosyl hydrolases family 35 catalytic domain | 0 | Direct |
| MSP-like | 0 | Direct |
| HAT/Suf repeat | 0 | Direct |
| WW domain | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Reductases | 0 | Direct |
| E2F dimerization segment | 0 | Direct |
| CHY zinc finger | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| PWWP domain | 0 | Direct |
| Serine acetyltransferase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Rps19E-like | 0 | Direct |
| SBT domain | 0 | Direct |
| beta-Phosphoglucomutase-like | 0 | Direct |
| HspBP1 domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ZZ domain | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| HCP-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| XPF/Rad1/Mus81 nuclease | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| Nitrogenase iron protein-like | 0 | Direct |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | Direct |
| 28-residue LRR | 0 | Direct |
| GABARAP-like | 0 | Direct |
| L30e/L7ae ribosomal proteins | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Poly A polymerase head domain-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| PyrH-like | 0 | Direct |
| Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| At5g01610-like | 0 | Direct |
| Multidrug resistance efflux transporter EmrE | 0 | Direct |
| Single-domain sulfurtransferase | 0 | Direct |
| PDI-like | 0 | Direct |
| Band 7/SPFH domain | 0 | Direct |
| HesB-like domain | 0 | Direct |
| 3-Methyladenine DNA glycosylase I (Tag) | 0 | Direct |
| Swaposin | 0 | Direct |
| 5' to 3' exonuclease catalytic domain | 0 | Direct |
| La domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
| GAF domain | 0 | Direct |
| PaaI/YdiI-like | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
| L23p | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Tryptophan biosynthesis enzymes | 0 | Direct |
| Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | Direct |
| Ribosomal proteins L24p and L21e | 0 | Direct |
| Gtf glycosyltransferase | 0 | Direct |
| Starch-binding domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Ferritin | 0 | Direct |
| Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain | 0 | Direct |
| CRAL/TRIO domain | 0 | Direct |
| Myf domain | 0 | Direct |
| FAH | 0 | Direct |
| Sm motif of small nuclear ribonucleoproteins, SNRNP | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| C5 cytosine-specific DNA methylase, DCM | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| AlkB-like | 0 | Direct |
| Ribosomal protein L18 and S11 | 0 | Direct |
| Hypothetical protein HI1317 | 0 | Direct |
| Carboxylesterase/thioesterase 1 | 0 | Direct |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
| DLC | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Release factor | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Putative glucosidase YicI, domain 3 | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| rRNA adenine dimethylase-like | 0 | Direct |
| Pyruvate oxidase and decarboxylase Pyr module | 0 | Direct |
| SH3-domain | 0 | Direct |
| LysM domain | 0 | Direct |
| Glucose 6-phosphate dehydrogenase-like | 0 | Direct |
| MoCo carrier protein-like | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| SWIRM domain | 0 | Direct |
| NOL1/NOP2/sun | 0 | Direct |
| Subtilase propeptides/inhibitors | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| SIAH, seven in absentia homolog | 0 | Direct |
| RNA-polymerase beta-prime | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| R3H domain | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| Nuclear movement domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Ribonuclease H | 0 | Direct |
| Glycerol-3-phosphate transporter | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Chromo barrel domain | 0 | Direct |
| B56-like | 0 | Direct |
| Kunitz (STI) inhibitors | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Ribosomal S5 protein, N-terminal domain | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| BAR domain | 0 | Direct |
| RibA-like | 0 | Direct |
| DNA repair protein MutS, domain III | 0 | Direct |
| DNA polymerase processivity factor | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| C1-like domain | 0 | Direct |
| Amylase, catalytic domain | 0 | Direct |
| Arginine methyltransferase | 0 | Direct |
| Cystatins | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| RNase III catalytic domain-like | 0 | Direct |
| Diacylglycerol kinase-like | 0 | Direct |
| LON domain-like | 0 | Direct |
| Rubredoxin | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | Direct |
| Prefoldin | 0 | Direct |
| ATP sulfurylase N-terminal domain | 0 | Direct |
| Glutamine synthetase catalytic domain | 0 | Direct |
| SAM (sterile alpha motif) domain | 0 | Direct |
| MIF-related | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| Glycosyl hydrolases family 32 N-terminal domain | 0 | Direct |
| PAZ domain | 0 | Direct |
| 2Fe-2S ferredoxin domains from multidomain proteins | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| beta-N-acetylhexosaminidase catalytic domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Smr domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| SerA intervening domain-like | 0 | Direct |
| Clc chloride channel | 0 | Direct |
| Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
| Ribosomal protein L5 | 0 | Direct |
| Hypothetical protein TM1112 | 0 | Direct |
| Receiver domain of the ethylene receptor | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| 4HBT-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| UBX domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Aspartokinase allosteric domain-like | 0 | Direct |
| RNA methyltransferase FtsJ | 0 | Direct |
| Choline kinase | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Class II glutamine amidotransferases | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Amine oxidase N-terminal region | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase PP module | 0 | Direct |
| Prokaryotic proteases | 0 | Direct |
| Linker histone H1/H5 | 0 | Direct |
| MYND zinc finger | 0 | Direct |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
| Ribonuclease Rh-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Cell cycle transcription factor e2f-dp | 0 | Direct |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | Direct |
| Acyl-ACP thioesterase-like | 0 | Direct |
| HD domain | 0 | Direct |
| Lactate & malate dehydrogenases, C-terminal domain | 0 | Direct |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Plant defensins | 0 | Direct |
| Trehalose-6-phosphate synthase, OtsA | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| CAF1-like ribonuclease | 0 | Direct |
| ATP-dependent DNA ligase catalytic domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| Dihydrodipicolinate reductase-like | 0 | Direct |
| Phosphoenolpyruvate mutase/Isocitrate lyase-like | 0 | Direct |
| DJ-1/PfpI | 0 | Direct |
| GAT domain | 0 | Direct |
| Neurolysin-like | 0 | Direct |
| Pseudouridine synthase I TruA | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | Direct |
| Enolase | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| LplA-like | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| RNase Z-like | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| Cyclin A/CDK2-associated p19, Skp2 | 0 | Direct |
| PX domain | 0 | Direct |
| CO dehydrogenase ISP C-domain like | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Phosphorelay protein-like | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Tail specific protease, catalytic domain | 0 | Direct |
| NifU C-terminal domain-like | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| Galactosyltransferase LgtC | 0 | Direct |
| RelA/SpoT domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| GroES | 0 | Direct |
| PsbP-like | 0 | Direct |
| CRAL/TRIO N-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Deoxycytidylate deaminase-like | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| YicI catalytic domain-like | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| PNP-oxidase like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| Type II chitinase | 0 | Direct |
| monodomain cytochrome c | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| PAPS sulfotransferase | 0 | Direct |
| GroEL-like chaperone, intermediate domain | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Ribosomal protein L19 | 0 | Direct |
| LEA14-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| BEACH domain | 0 | Direct |
| Cytochrome b5 | 0 | Direct |
| AF1104-like | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| ARID domain | 0 | Direct |
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 0 | Direct |
| N-type ATP pyrophosphatases | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| BSD domain | 0 | Direct |
| Thioesterases | 0 | Direct |
| Prolyl oligopeptidase, C-terminal domain | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | Direct |
| Dual specificity phosphatase-like | 0 | Direct |
| Thiolase-related | 0 | Direct |
| TAZ domain | 0 | Direct |
| Patatin | 0 | Direct |
| Shikimate kinase (AroK) | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| Gamma-glutamyl cyclotransferase-like | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| ALDH-like | 0 | Direct |
| PA domain | 0 | Direct |
| Exostosin | 0 | Direct |
| Plus3 | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| Pyruvate oxidase and decarboxylase PP module | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | Direct |
| SelR domain | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Chromo domain | 0 | Direct |
| Histidine kinase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Ribosomal protein L3 | 0 | Direct |
| VHS domain | 0 | Direct |
| Pseudouridine synthase RsuA/RluD | 0 | Direct |
| Plant transcriptional regulator PBF-2 | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| alpha-D-mannose-specific plant lectins | 0 | Direct |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| NHL repeat | 0 | Direct |
| CAT-like | 0 | Direct |
| Anti-sigma factor antagonist SpoIIaa | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Class I aldolase | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| FucT-like | 0 | Direct |
| FHA domain | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| 1,3-glucuronyltransferase | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| Pyridoxal-dependent decarboxylase | 0 | Direct |
| Phosphoribosylpyrophosphate synthetase-like | 0 | Direct |
| MutT-like | 0 | Direct |
| WrbA-like | 0 | Direct |
| GDI-like N domain | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| GroEL chaperone, ATPase domain | 0 | Direct |
| Hypothetical protein At2g34160 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| BC ATP-binding domain-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| NLI interacting factor-like phosphatase | 0 | Direct |
| eIF1-like | 0 | Direct |
| STAR domain | 0 | Direct |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | Direct |
| Translational machinery components | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| SOUL heme-binding protein | 0 | Direct |
| PhzC/PhzF-like | 0 | Direct |
| HMG-box | 0 | Direct |
| Methyl-CpG-binding domain, MBD | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| ATP sulfurylase catalytic domain | 0 | Direct |
| Cell cycle arrest protein BUB3 | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| BC N-terminal domain-like | 0 | Direct |
| N-acetyl-l-glutamate kinase | 0 | Direct |
| RhoGDI-like | 0 | Direct |
| HAL/PAL-like | 0 | Direct |
| Phytochrome-specific domain | 0 | Direct |
| ATP-dependent DNA ligase DNA-binding domain | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | Direct |
| Ribosomal protein L37e | 0 | Direct |
| EDF1-like | 0 | Direct |
| YhbY-like | 0 | Direct |
| SufE-like | 0 | Direct |
| RplX-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| TRM1-like | 0 | Direct |
| Pentapeptide repeats | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Cofactor-dependent phosphoglycerate mutase | 0 | Direct |
| FKBP immunophilin/proline isomerase | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Double-stranded RNA-binding domain (dsRBD) | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| BC C-terminal domain-like | 0 | Direct |
| Ubiquitin activating enzymes (UBA) | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| DNA ligase/mRNA capping enzyme postcatalytic domain | 0 | Direct |
| Malic enzyme N-domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Aldo-keto reductases (NADP) | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain | 0 | Direct |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| Preprotein translocase SecY subunit | 0 | Direct |
| eIF5a N-terminal domain-like | 0 | Direct |
| Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
| ATP-dependent protease Lon (La), catalytic domain | 0 | Direct |
| LDH N-terminal domain-like | 0 | Direct |
| Protein prenyltransferases | 0 | Direct |
| RNA-polymerase beta | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| Ribosomal protein L7/12, C-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
| Tandem AAA-ATPase domain | 0.00001885 | Direct |
| Canonical RBD | 0.0009481 | Direct |
| Homeodomain | 0.005402 | Inherited |
| Cold shock DNA-binding domain-like | 0.02435 | Inherited |
| Mitochondrial carrier | 0.04818 | Inherited |
| Multidomain cupredoxins | 0.06847 | Inherited |
| WD40-repeat | 0.1288 | Inherited |
| PHD domain | 0.2334 | Inherited |
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0.2801 | Inherited |
| PP2C-like | 0.43 | Inherited |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.4876 | Inherited |
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain | 0.5449 | Inherited |
| Anticodon-binding domain of Class II aaRS | 0.684 | Inherited |
| DNA replication initiator (cdc21/cdc54) N-terminal domain | 0.7427 | Inherited |
| Nucleosome core histones | 0.7595 | Inherited |
| Inositol polyphosphate 5-phosphatase (IPP5) | 0.9364 | Inherited |
| Actin/HSP70 | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| Carboxylesterase | 1 | Inherited |
| ABC transporter transmembrane region | 1 | Inherited |
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A presence/absence matrix is generated using protein domain
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Supra-domain (including individual superfamily)
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| FAH | 0 | DIRECT |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Ribosomal L27 protein-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Scorpion toxin-like | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
| EGF/Laminin | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Trypsin-like serine proteases | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| PAH2 domain | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Arabinanase/levansucrase/invertase | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Amine oxidase N-terminal region | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| alpha-D-mannose-specific plant lectins | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Enolase C-terminal domain-like | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| MCP/YpsA-like | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Carbon-nitrogen hydrolase | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| dsRNA-binding domain-like | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| SMAD/FHA domain | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| LDH C-terminal domain-like | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| At5g01610-like | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Preprotein translocase SecY subunit | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| ATP-dependent DNA ligase DNA-binding domain | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| Cysteine alpha-hairpin motif | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| BEACH domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| DNA-glycosylase | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| CO dehydrogenase ISP C-domain like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| 2Fe-2S ferredoxin-like | 0 | DIRECT |
| DLC | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| PDZ domain-like | 0 | DIRECT |
| SBT domain | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| NagB/RpiA/CoA transferase-like | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| CRAL/TRIO N-terminal domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Saposin | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| Alkaline phosphatase-like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Phosphoglycerate mutase-like | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| ARID-like | 0 | DIRECT |
| Cyclophilin-like | 0 | DIRECT |
| DNA repair protein MutS, domain III | 0 | DIRECT |
| PAZ domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| Probable bacterial effector-binding domain | 0 | DIRECT |
| Ribosomal protein L25-like | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Phospholipase C/P1 nuclease | 0 | DIRECT |
| PapD-like | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| Macro domain-like | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| PIN domain-like | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
| TK C-terminal domain-like | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribulose-phoshate binding barrel | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| Undecaprenyl diphosphate synthase | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Clc chloride channel | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| DHS-like NAD/FAD-binding domain | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| NAD(P)-linked oxidoreductase | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| ClpS-like | 0 | DIRECT |
| Ricin B-like lectins | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| CHY zinc finger-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Plus3-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Restriction endonuclease-like | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| RNase III domain-like | 0 | DIRECT |
| HCP-like | 0 | DIRECT |
| CRAL/TRIO domain | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| Carbohydrate phosphatase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Crambin-like | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| Sm-like ribonucleoproteins | 0 | DIRECT |
| STI-like | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Aldolase | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| BRCT domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| Ribonuclease Rh-like | 0 | DIRECT |
| Molybdenum cofactor-binding domain | 0 | DIRECT |
| SAM/Pointed domain | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| RNA-binding domain, RBD | 0.002566 | INHERITED FROM: F mature embryo stage || LP.02 two leaves visible stage || D bilateral stage || E expanded cotyledon stage || leaf production stage || plant embryo stage |
| TPR-like | 0.00469 | INHERITED FROM: 0 seed germination stage || E expanded cotyledon stage || plant embryo stage |
| ClpP/crotonase | 0.06405 | INHERITED FROM: F mature embryo stage |
| Bet v1-like | 0.06611 | INHERITED FROM: seedling development stage |
| Nucleic acid-binding proteins | 0.07292 | INHERITED FROM: sporophyte reproductive stage || E expanded cotyledon stage || whole plant inflorescence detectable stage |
| Nucleotidylyl transferase | 0.07841 | INHERITED FROM: F mature embryo stage || D bilateral stage || E expanded cotyledon stage |
| ACT-like | 0.106 | INHERITED FROM: LP.06 six leaves visible stage || LP.12 twelve leaves visible stage || LP.10 ten leaves visible stage |
| WD40 repeat-like | 0.1253 | INHERITED FROM: E expanded cotyledon stage |
| NAD(P)-binding Rossmann-fold domains | 0.2186 | INHERITED FROM: LP.06 six leaves visible stage || LP.08 eight leaves visible stage || LP.02 two leaves visible stage |
| Thioredoxin-like | 0.249 | INHERITED FROM: leaf production stage || 1 main shoot growth stage |
| Cupredoxins | 0.2548 | INHERITED FROM: seedling development stage |
| ARM repeat | 0.3285 | INHERITED FROM: F mature embryo stage || D bilateral stage || E expanded cotyledon stage |
| P-loop containing nucleoside triphosphate hydrolases | 0.331 | INHERITED FROM: sporophyte reproductive stage |
| Class II aaRS ABD-related | 0.4764 | INHERITED FROM: 0 seed germination stage |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.4764 | INHERITED FROM: 0 seed germination stage |
| GAF domain-like | 0.5154 | INHERITED FROM: seedling development stage |
| Class II aaRS and biotin synthetases | 0.7266 | INHERITED FROM: 0 seed germination stage |
| DNA/RNA polymerases | 0.8244 | INHERITED FROM: 0 seed germination stage |
| Histone-fold | 0.9179 | INHERITED FROM: seedling development stage |
| ABC transporter transmembrane region | 1 | INHERITED FROM: seedling development stage |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: seedling development stage |
| alpha/beta-Hydrolases | 1 | INHERITED FROM: seed imbibition stage |
| Homeodomain-like | 1 | INHERITED FROM: seedling development stage |
| Actin-like ATPase domain | 1 | INHERITED FROM: seedling development stage |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| FAH | 0 | Direct |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Ribosomal L27 protein-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Scorpion toxin-like | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| BolA-like | 0 | Direct |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
| EGF/Laminin | 0 | Direct |
| PX domain | 0 | Direct |
| Trypsin-like serine proteases | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| AF1104-like | 0 | Direct |
| Lipocalins | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| AlbA-like | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| PAH2 domain | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| FF domain | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| eIF1-like | 0 | Direct |
| Arabinanase/levansucrase/invertase | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Amine oxidase N-terminal region | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| FKBP-like | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Mss4-like | 0 | Direct |
| TAZ domain | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| RplX-like | 0 | Direct |
| alpha-D-mannose-specific plant lectins | 0 | Direct |
| WW domain | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Enolase C-terminal domain-like | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| MCP/YpsA-like | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Carbon-nitrogen hydrolase | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| YhbY-like | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| dsRNA-binding domain-like | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| SMAD/FHA domain | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| LDH C-terminal domain-like | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| At5g01610-like | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Preprotein translocase SecY subunit | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| ATP-dependent DNA ligase DNA-binding domain | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| Cysteine alpha-hairpin motif | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| L28p-like | 0 | Direct |
| BEACH domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| DNA-glycosylase | 0 | Direct |
| R3H domain | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Tim10-like | 0 | Direct |
| CO dehydrogenase ISP C-domain like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| 2Fe-2S ferredoxin-like | 0 | Direct |
| DLC | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| PDZ domain-like | 0 | Direct |
| SBT domain | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| NagB/RpiA/CoA transferase-like | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| CRAL/TRIO N-terminal domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Rhodanese/Cell cycle control phosphatase | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Saposin | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| Alkaline phosphatase-like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| HIT-like | 0 | Direct |
| RibA-like | 0 | Direct |
| Phosphoglycerate mutase-like | 0 | Direct |
| NHL repeat | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| ARID-like | 0 | Direct |
| Cyclophilin-like | 0 | Direct |
| DNA repair protein MutS, domain III | 0 | Direct |
| PAZ domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| Cytochrome c | 0 | Direct |
| Probable bacterial effector-binding domain | 0 | Direct |
| Ribosomal protein L25-like | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Phospholipase C/P1 nuclease | 0 | Direct |
| PapD-like | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| Macro domain-like | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| PIN domain-like | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| RL5-like | 0 | Direct |
| Gamma-glutamyl cyclotransferase-like | 0 | Direct |
| TK C-terminal domain-like | 0 | Direct |
| HRDC-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribulose-phoshate binding barrel | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| Undecaprenyl diphosphate synthase | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| SMR domain-like | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| ALDH-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Caspase-like | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Clc chloride channel | 0 | Direct |
| GlnB-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| ADC-like | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Chelatase | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| LysM domain | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| DHS-like NAD/FAD-binding domain | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| NAD(P)-linked oxidoreductase | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| ClpS-like | 0 | Direct |
| Ricin B-like lectins | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| CHY zinc finger-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Formyltransferase | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Plus3-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Restriction endonuclease-like | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| DNA clamp | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| RNase III domain-like | 0 | Direct |
| HCP-like | 0 | Direct |
| CRAL/TRIO domain | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| Carbohydrate phosphatase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Release factor | 0 | Direct |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Crambin-like | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Globin-like | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Prefoldin | 0 | Direct |
| Sm-like ribonucleoproteins | 0 | Direct |
| STI-like | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Aldolase | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| SH3-domain | 0 | Direct |
| HMG-box | 0 | Direct |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| BRCT domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| LigT-like | 0 | Direct |
| Ribonuclease Rh-like | 0 | Direct |
| Molybdenum cofactor-binding domain | 0 | Direct |
| SAM/Pointed domain | 0 | Direct |
| SIS domain | 0 | Direct |
| LanC-like | 0 | Direct |
| RraA-like | 0 | Direct |
| RNA-binding domain, RBD | 0.002566 | Inherited |
| TPR-like | 0.00469 | Inherited |
| ClpP/crotonase | 0.06405 | Inherited |
| Bet v1-like | 0.06611 | Inherited |
| Nucleic acid-binding proteins | 0.07292 | Inherited |
| Nucleotidylyl transferase | 0.07841 | Inherited |
| ACT-like | 0.106 | Inherited |
| WD40 repeat-like | 0.1253 | Inherited |
| NAD(P)-binding Rossmann-fold domains | 0.2186 | Inherited |
| Thioredoxin-like | 0.249 | Inherited |
| Cupredoxins | 0.2548 | Inherited |
| ARM repeat | 0.3285 | Inherited |
| P-loop containing nucleoside triphosphate hydrolases | 0.331 | Inherited |
| Class II aaRS ABD-related | 0.4764 | Inherited |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.4764 | Inherited |
| GAF domain-like | 0.5154 | Inherited |
| Class II aaRS and biotin synthetases | 0.7266 | Inherited |
| DNA/RNA polymerases | 0.8244 | Inherited |
| Histone-fold | 0.9179 | Inherited |
| ABC transporter transmembrane region | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| alpha/beta-Hydrolases | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
| Actin-like ATPase domain | 1 | Inherited |
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52047,56112
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
55447,54665
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
57903,57903
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger | 0 | DIRECT |
161219,161245
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack | 0 | DIRECT |
101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | DIRECT |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
50494,50156
50494 - Trypsin-like serine proteases
50156 - PDZ domain-like | 0 | DIRECT |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | DIRECT |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
56235,53271
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
53271 - PRTase-like | 0 | DIRECT |
54292,47741
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like | 0 | DIRECT |
110324,50249
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
56176,55447
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
47762,47762
47762 - PAH2 domain
47762 - PAH2 domain | 0 | DIRECT |
54211,55666
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | DIRECT |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | DIRECT |
54768,54768
54768 - dsRNA-binding domain-like
54768 - dsRNA-binding domain-like | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
56091,50249
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
54695,48403
54695 - POZ domain
48403 - Ankyrin repeat | 0 | DIRECT |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
88697,82199
88697 - PUA domain-like
82199 - SET domain | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | DIRECT |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
54368,55931
54368 - Glutamine synthetase, N-terminal domain
55931 - Glutamine synthetase/guanido kinase | 0 | DIRECT |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
52047,52047
52047 - RNI-like
52047 - RNI-like | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54826,51604
54826 - Enolase N-terminal domain-like
51604 - Enolase C-terminal domain-like | 0 | DIRECT |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | DIRECT |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | DIRECT |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | DIRECT |
103481,103481
103481 - Multidrug resistance efflux transporter EmrE
103481 - Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
50978,50978
50978 - WD40 repeat-like
50978 - WD40 repeat-like | 0 | DIRECT |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
50249,52540
50249 - Nucleic acid-binding proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | DIRECT |
69065,54768
69065 - RNase III domain-like
54768 - dsRNA-binding domain-like | 0 | DIRECT |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
48334,52540
48334 - DNA repair protein MutS, domain III
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50729,81837
50729 - PH domain-like
81837 - BEACH domain | 0 | DIRECT |
47592,159042
47592 - SWIB/MDM2 domain
159042 - Plus3-like | 0 | DIRECT |
74650,49452
74650 - Galactose mutarotase-like
49452 - Starch-binding domain-like | 0 | DIRECT |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
161245,57850
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | DIRECT |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | DIRECT |
52467,52518
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | DIRECT |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
49599,49599
49599 - TRAF domain-like
49599 - TRAF domain-like | 0 | DIRECT |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | DIRECT |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
54171,54171
54171 - DNA-binding domain
54171 - DNA-binding domain | 0 | DIRECT |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | DIRECT |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | DIRECT |
90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
117018,56091
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
74650,51445
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases | 0 | DIRECT |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
75471,75471
75471 - YhbY-like
75471 - YhbY-like | 0 | DIRECT |
48452,46565
48452 - TPR-like
46565 - Chaperone J-domain | 0 | DIRECT |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | DIRECT |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | DIRECT |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | DIRECT |
56112,57850
56112 - Protein kinase-like (PK-like)
57850 - RING/U-box | 0 | DIRECT |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | DIRECT |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
54665,56003
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | DIRECT |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | DIRECT |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
50630,47862
50630 - Acid proteases
47862 - Saposin | 0 | DIRECT |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | DIRECT |
46938,52087
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain | 0 | DIRECT |
51445,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like | 0 | DIRECT |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
54292,46548
54292 - 2Fe-2S ferredoxin-like
46548 - alpha-helical ferredoxin | 0 | DIRECT |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | DIRECT |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | DIRECT |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | DIRECT |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
49785,49785
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
51695,51695
51695 - PLC-like phosphodiesterases
51695 - PLC-like phosphodiesterases | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
47741,56176
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | DIRECT |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | DIRECT |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | DIRECT |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
57903,55729
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
52518,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
46785,46785
46785 - "Winged helix" DNA-binding domain
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
47473,51695
47473 - EF-hand
51695 - PLC-like phosphodiesterases | 0 | DIRECT |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | DIRECT |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | DIRECT |
51735,56327
51735 - NAD(P)-binding Rossmann-fold domains
56327 - LDH C-terminal domain-like | 0 | DIRECT |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
53187,55031
53187 - Zn-dependent exopeptidases
55031 - Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
54416,54416
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
50985,50985
50985 - RCC1/BLIP-II
50985 - RCC1/BLIP-II | 0 | DIRECT |
54928,57756
54928 - RNA-binding domain, RBD
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
81383,52058
81383 - F-box domain
52058 - L domain-like | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
75005,49899
75005 - Arabinanase/levansucrase/invertase
49899 - Concanavalin A-like lectins/glucanases | 0 | DIRECT |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
49899,56112
49899 - Concanavalin A-like lectins/glucanases
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
54416,49998
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52518,52467
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain | 0 | DIRECT |
54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0.02565 | INHERITED FROM: sporophyte reproductive stage || E expanded cotyledon stage || whole plant inflorescence detectable stage || C globular stage |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 0.07089 | INHERITED FROM: seedling development stage |
55961,55961
55961 - Bet v1-like
55961 - Bet v1-like | 0.4363 | INHERITED FROM: seedling development stage |
48452,48452
48452 - TPR-like
48452 - TPR-like | 0.8392 | INHERITED FROM: 0 seed germination stage |
90123,52540
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 1 | INHERITED FROM: seedling development stage |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 1 | INHERITED FROM: seedling development stage |
54695,81382
54695 - POZ domain
81382 - Skp1 dimerisation domain-like | 1 | INHERITED FROM: seedling development stage |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 1 | INHERITED FROM: seedling development stage |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52047,56112
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
55447,54665
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
57903,57903
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger | 0 | Direct |
161219,161245
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack | 0 | Direct |
101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | Direct |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
50494,50156
50494 - Trypsin-like serine proteases
50156 - PDZ domain-like | 0 | Direct |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | Direct |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | Direct |
56235,53271
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
53271 - PRTase-like | 0 | Direct |
54292,47741
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like | 0 | Direct |
110324,50249
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins | 0 | Direct |
56176,55447
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
47762,47762
47762 - PAH2 domain
47762 - PAH2 domain | 0 | Direct |
54211,55666
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | Direct |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | Direct |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | Direct |
54768,54768
54768 - dsRNA-binding domain-like
54768 - dsRNA-binding domain-like | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
56091,50249
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
54695,48403
54695 - POZ domain
48403 - Ankyrin repeat | 0 | Direct |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
88697,82199
88697 - PUA domain-like
82199 - SET domain | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | Direct |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
54368,55931
54368 - Glutamine synthetase, N-terminal domain
55931 - Glutamine synthetase/guanido kinase | 0 | Direct |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
52047,52047
52047 - RNI-like
52047 - RNI-like | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54826,51604
54826 - Enolase N-terminal domain-like
51604 - Enolase C-terminal domain-like | 0 | Direct |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | Direct |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | Direct |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | Direct |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | Direct |
103481,103481
103481 - Multidrug resistance efflux transporter EmrE
103481 - Multidrug resistance efflux transporter EmrE | 0 | Direct |
50978,50978
50978 - WD40 repeat-like
50978 - WD40 repeat-like | 0 | Direct |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
50249,52540
50249 - Nucleic acid-binding proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | Direct |
69065,54768
69065 - RNase III domain-like
54768 - dsRNA-binding domain-like | 0 | Direct |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
48334,52540
48334 - DNA repair protein MutS, domain III
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50729,81837
50729 - PH domain-like
81837 - BEACH domain | 0 | Direct |
47592,159042
47592 - SWIB/MDM2 domain
159042 - Plus3-like | 0 | Direct |
74650,49452
74650 - Galactose mutarotase-like
49452 - Starch-binding domain-like | 0 | Direct |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
161245,57850
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | Direct |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | Direct |
52467,52518
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | Direct |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
49599,49599
49599 - TRAF domain-like
49599 - TRAF domain-like | 0 | Direct |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | Direct |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | Direct |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
54171,54171
54171 - DNA-binding domain
54171 - DNA-binding domain | 0 | Direct |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | Direct |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | Direct |
90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
117018,56091
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
74650,51445
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases | 0 | Direct |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
75471,75471
75471 - YhbY-like
75471 - YhbY-like | 0 | Direct |
48452,46565
48452 - TPR-like
46565 - Chaperone J-domain | 0 | Direct |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | Direct |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | Direct |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | Direct |
56112,57850
56112 - Protein kinase-like (PK-like)
57850 - RING/U-box | 0 | Direct |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | Direct |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
54665,56003
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | Direct |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | Direct |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
50630,47862
50630 - Acid proteases
47862 - Saposin | 0 | Direct |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | Direct |
46938,52087
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain | 0 | Direct |
51445,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like | 0 | Direct |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
54292,46548
54292 - 2Fe-2S ferredoxin-like
46548 - alpha-helical ferredoxin | 0 | Direct |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | Direct |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | Direct |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | Direct |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
49785,49785
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
51695,51695
51695 - PLC-like phosphodiesterases
51695 - PLC-like phosphodiesterases | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
47741,56176
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | Direct |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | Direct |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | Direct |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
57903,55729
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
52518,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
46785,46785
46785 - "Winged helix" DNA-binding domain
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
47473,51695
47473 - EF-hand
51695 - PLC-like phosphodiesterases | 0 | Direct |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | Direct |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | Direct |
51735,56327
51735 - NAD(P)-binding Rossmann-fold domains
56327 - LDH C-terminal domain-like | 0 | Direct |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
53187,55031
53187 - Zn-dependent exopeptidases
55031 - Bacterial exopeptidase dimerisation domain | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
54416,54416
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
50985,50985
50985 - RCC1/BLIP-II
50985 - RCC1/BLIP-II | 0 | Direct |
54928,57756
54928 - RNA-binding domain, RBD
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
81383,52058
81383 - F-box domain
52058 - L domain-like | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
75005,49899
75005 - Arabinanase/levansucrase/invertase
49899 - Concanavalin A-like lectins/glucanases | 0 | Direct |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
49899,56112
49899 - Concanavalin A-like lectins/glucanases
56112 - Protein kinase-like (PK-like) | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
54416,49998
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52518,52467
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain | 0 | Direct |
54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0.02565 | Inherited |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 0.07089 | Inherited |
55961,55961
55961 - Bet v1-like
55961 - Bet v1-like | 0.4363 | Inherited |
48452,48452
48452 - TPR-like
48452 - TPR-like | 0.8392 | Inherited |
90123,52540
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 1 | Inherited |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 1 | Inherited |
54695,81382
54695 - POZ domain
81382 - Skp1 dimerisation domain-like | 1 | Inherited |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 1 | Inherited |
(show details)
Supra-domains annotated to this AP term (Not in SPAP)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
54928,54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
54416,54416,49998
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | DIRECT |
47473,51695,49562
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
54292,47741,56176
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | DIRECT |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
81383,52047,52047
81383 - F-box domain
52047 - RNI-like
52047 - RNI-like | 0 | DIRECT |
47741,56176,55447
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
52058,52047,56112
52058 - L domain-like
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
117018,56091,50249
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
55447,54665,56003
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | DIRECT |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | DIRECT |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
56176,55447,54665
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
74650,49452,49785
74650 - Galactose mutarotase-like
49452 - Starch-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | DIRECT |
52518,52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | DIRECT |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | DIRECT |
74650,51445,51011
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
101936,101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
52518,52467,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52058,52058,56112
52058 - L domain-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52047,52047,56112
52047 - RNI-like
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
161219,161245,57850
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 1 | INHERITED FROM: seedling development stage |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 1 | INHERITED FROM: seedling development stage |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
54928,54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
54416,54416,49998
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | Direct |
47473,51695,49562
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
54292,47741,56176
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | Direct |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
81383,52047,52047
81383 - F-box domain
52047 - RNI-like
52047 - RNI-like | 0 | Direct |
47741,56176,55447
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
52058,52047,56112
52058 - L domain-like
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
117018,56091,50249
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
55447,54665,56003
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | Direct |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | Direct |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | Direct |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
56176,55447,54665
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
74650,49452,49785
74650 - Galactose mutarotase-like
49452 - Starch-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | Direct |
52518,52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | Direct |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | Direct |
74650,51445,51011
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
101936,101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
52518,52467,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52058,52058,56112
52058 - L domain-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52047,52047,56112
52047 - RNI-like
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
161219,161245,57850
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 1 | Inherited |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 1 | Inherited |
Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
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