SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): seed coat

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   plant anatomical entity [PO:0025131] <3>
+ + 2:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + 2:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ 1:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ 1:   seed [PO:0009010] <12>(145|241) (145|116|42)
0:   seed coat [PO:0009088] <4>(2|2) (2|1|0)
- 1:   seed coat epidermis [PO:0006048] <6>(0|0) (0|0|0)
- 1:   tegmen [PO:0020056] <2>(0|0) (0|0|0)
- 1:   testa [PO:0020057] <2>(0|0) (0|0|0)
- 1:   seed micropyle [PO:0006334](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000008968Direct
POZ domain0.000001949Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000003256Direct
BTB/POZ domain0.00000005763Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000006932Direct
POZ domain0.000001515Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0000000006932Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)