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  Home > Phenotype Ontology > organ lamina

Plant ANatomical entity (PAN): organ lamina

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + 2:   cardinal part of multi-tissue plant structure [PO:0025498] <8>(185|291) (186|132|50)
+ 1:   lamina [PO:0025060] <2>(116|191) (116|90|39)
0:   organ lamina [PO:0025513] <2>(116|191) (116|90|39)
- 1:   phyllome lamina [PO:0025396] <7>(116|191) (116|90|39)
- 1:   organ margin [PO:0025005] <1>(0|0) (0|0|0)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Signal peptide-binding domain1Inherited
E2F-DP heterodimerization region1Inherited
SH3-domain1Inherited
RraA-like1Inherited
DNA repair protein MutS, domain I1Inherited
Lipocalins1Inherited
LysM domain1Inherited
Head domain of nucleotide exchange factor GrpE1Inherited
TATA-box binding protein-like1Inherited
Composite domain of metallo-dependent hydrolases1Inherited
Ribosomal L11/L12e N-terminal domain1Inherited
C-terminal, gelsolin-like domain of Sec23/241Inherited
Cdc48 domain 2-like1Inherited
Ribosomal protein L30p/L7e1Inherited
tRNA-binding arm1Inherited
LeuD/IlvD-like1Inherited
Ribosomal protein L31e1Inherited
Phosphoglycerate kinase1Inherited
lambda repressor-like DNA-binding domains1Inherited
Nucleotidylyl transferase1Inherited
N-terminal, heterodimerisation domain of RBP7 (RpoE)1Inherited
Putative isomerase YbhE1Inherited
YrdC/RibB1Inherited
Tautomerase/MIF1Inherited
Transducin (alpha subunit), insertion domain1Inherited
Tetrapyrrole methylase1Inherited
Ribosomal protein L41Inherited
Electron transport accessory proteins1Inherited
P-domain of calnexin/calreticulin1Inherited
Single hybrid motif1Inherited
Chelatase1Inherited
FKBP-like1Inherited
Preprotein translocase SecE subunit1Inherited
Sigma3 and sigma4 domains of RNA polymerase sigma factors1Inherited
Prokaryotic type I DNA topoisomerase1Inherited
Zn-finger domain of Sec23/241Inherited
Pentapeptide repeat-like1Inherited
BolA-like1Inherited
RuBisCo LSMT C-terminal, substrate-binding domain1Inherited
Ribosomal protein L19 (L19e)1Inherited
Folate-binding domain1Inherited
Expressed protein At2g23090/F21P24.151Inherited
Ribosomal protein L39e1Inherited
Hypothetical protein YjiA, C-terminal domain1Inherited
Metallo-dependent hydrolases1Inherited
LuxS/MPP-like metallohydrolase1Inherited
Cu,Zn superoxide dismutase-like1Inherited
Leukotriene A4 hydrolase N-terminal domain1Inherited
AMPKBI-like1Inherited
Ribosomal protein L131Inherited
Phosphoglucomutase, C-terminal domain1Inherited
Chorismate mutase II1Inherited
N-terminal domain of the delta subunit of the F1F0-ATP synthase1Inherited
Ligand-binding domain in the NO signalling and Golgi transport1Inherited
FF domain1Inherited
Phosphoglucomutase, first 3 domains1Inherited
GlnB-like1Inherited
Serine metabolism enzymes domain1Inherited
FAH1Inherited
Sigma2 domain of RNA polymerase sigma factors1Inherited
Ribosomal protein L10-like1Inherited
Diaminopimelate epimerase-like1Inherited
S13-like H2TH domain1Inherited
Ribosomal protein S21Inherited
DNA repair protein MutS, domain II1Inherited
Tetrahydrobiopterin biosynthesis enzymes-like1Inherited
Ribosomal protein L16p/L10e1Inherited
ssDNA-binding transcriptional regulator domain1Inherited
GroEL-intermediate domain like1Inherited
Alpha-L RNA-binding motif1Inherited
GroEL equatorial domain-like1Inherited
GroEL apical domain-like1Inherited
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex1Inherited
Flavoproteins1Inherited
Cytochrome c1Inherited
Nicotinate/Quinolinate PRTase C-terminal domain-like1Inherited
Casein kinase II beta subunit1Inherited
Aconitase iron-sulfur domain1Inherited
Mitochondrial carrier1Inherited
eIF1-like1Inherited
Seven-hairpin glycosidases1Inherited
Succinyl-CoA synthetase domains1Inherited
CYTH-like phosphatases1Inherited
RNA-binding domain, RBD1Inherited
alpha-helical ferredoxin1Inherited
R3H domain1Inherited
Peptide methionine sulfoxide reductase1Inherited
Oxidoreductase molybdopterin-binding domain1Inherited
Prokaryotic ribosomal protein L171Inherited
MurD-like peptide ligases, catalytic domain1Inherited
Ribosomal protein S61Inherited
Nitrite and sulphite reductase 4Fe-4S domain-like1Inherited
MurD-like peptide ligases, peptide-binding domain1Inherited
Peptidase/esterase 'gauge' domain1Inherited
Ribosomal proteins S24e, L23 and L15e1Inherited
Ribosomal protein L29 (L29p)1Inherited
ATP synthase (F1-ATPase), gamma subunit1Inherited
SIS domain1Inherited
Ribosomal protein L141Inherited
NSFL1 (p97 ATPase) cofactor p47, SEP domain1Inherited
Cryptochrome/photolyase FAD-binding domain1Inherited
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain1Inherited
Alpha subunit of glutamate synthase, C-terminal domain1Inherited
S-adenosylmethionine synthetase1Inherited
ADC-like1Inherited
Tim10-like1Inherited
Helical domain of Sec23/241Inherited
Nicotinate/Quinolinate PRTase N-terminal domain-like1Inherited
RibA-like1Inherited
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor1Inherited
NHL repeat1Inherited
HesB-like domain1Inherited
Heme-dependent catalase-like1Inherited
Coiled-coil domain of nucleotide exchange factor GrpE1Inherited
Dimeric alpha+beta barrel1Inherited
XPC-binding domain1Inherited

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
GroEL-like chaperone, apical domain1Inherited
N-terminal, heterodimerisation domain of RBP7 (RpoE)1Inherited
Phosphoglucomutase, C-terminal domain1Inherited
FF domain1Inherited
Pseudouridine synthase II TruB1Inherited
Heme-dependent catalases1Inherited
AMPKBI-like1Inherited
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain1Inherited
DNase I-like1Inherited
Aminoacid dehydrogenases1Inherited
NADPH-cytochrome p450 reductase-like1Inherited
gamma-carbonic anhydrase-like1Inherited
Aminomethyltransferase folate-binding domain1Inherited
Sigma4 domain1Inherited
LeuD-like1Inherited
Prolyl oligopeptidase, N-terminal domain1Inherited
Allosteric chorismate mutase1Inherited
Tim10/DDP1Inherited
G domain-linked domain1Inherited
ATP synthase (F1-ATPase), gamma subunit1Inherited
NSFL1 (p97 ATPase) cofactor p47, SEP domain1Inherited
Trunk domain of Sec23/241Inherited
RWD domain1Inherited
CoA-binding domain1Inherited
PAPS reductase-like1Inherited
(Glycosyl)asparaginase1Inherited
Spermidine synthase1Inherited
Ribosomal protein L29 (L29p)1Inherited
MPP-like1Inherited
Leukotriene A4 hydrolase N-terminal domain1Inherited
Ribosomal protein L41Inherited
Group II chaperonin (CCT, TRIC), intermediate domain1Inherited
HAT/Suf repeat1Inherited
UDP-glucose pyrophosphorylase1Inherited
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB1Inherited
Coiled-coil domain of nucleotide exchange factor GrpE1Inherited
Reductases1Inherited
E2F dimerization segment1Inherited
Group II chaperonin (CCT, TRIC), apical domain1Inherited
Cdc48 domain 2-like1Inherited
Rps19E-like1Inherited
beta-Phosphoglucomutase-like1Inherited
S-adenosylmethionine synthetase1Inherited
ZZ domain1Inherited
Methionine aminopeptidase, insert domain1Inherited
GABARAP-like1Inherited
Nitrite and sulphite reductase 4Fe-4S domain-like1Inherited
Transcriptional coactivator PC4 C-terminal domain1Inherited
PDI-like1Inherited
HesB-like domain1Inherited
GAF domain1Inherited
Branched-chain alpha-keto acid dehydrogenase Pyr module1Inherited
L23p1Inherited
C-terminal, gelsolin-like domain of Sec23/241Inherited
Starch-binding domain1Inherited
Aconitase iron-sulfur domain1Inherited
Myf domain1Inherited
FAH1Inherited
Plant stress-induced protein1Inherited
Ribosomal protein S61Inherited
Ribosomal protein S131Inherited
Hypothetical protein HI13171Inherited
Ubiquitin carboxyl-terminal hydrolase UCH-L1Inherited
Ribosomal protein L30p/L7e1Inherited
Ribosomal L11/L12e N-terminal domain1Inherited
rRNA adenine dimethylase-like1Inherited
SH3-domain1Inherited
LysM domain1Inherited
Cryptochrome/photolyase FAD-binding domain1Inherited
R3H domain1Inherited
Cytidylyltransferase1Inherited
HEAT repeat1Inherited
Succinyl-CoA synthetase, beta-chain, N-terminal domain1Inherited
RraA-like1Inherited
Ribosomal protein S27e1Inherited
Ribosomal protein L10e1Inherited
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex1Inherited
BAR domain1Inherited
RibA-like1Inherited
BolA-like1Inherited
Ribosomal protein S151Inherited
LON domain-like1Inherited
Rubredoxin1Inherited
Transducin (alpha subunit), insertion domain1Inherited
ATP sulfurylase N-terminal domain1Inherited
MIF-related1Inherited
Ran-binding domain1Inherited
DNA repair protein MutS, domain I1Inherited
Mitochondrial carrier1Inherited
Class-II DAHP synthetase1Inherited
Prokaryotic ribosomal protein L171Inherited
Eps15 homology domain (EH domain)1Inherited
SerA intervening domain-like1Inherited
Ring hydroxylating alpha subunit ISP domain1Inherited
Receiver domain of the ethylene receptor1Inherited
Sigma2 domain of RNA polymerase sigma factors1Inherited
Ribosomal protein L131Inherited
Casein kinase II beta subunit1Inherited
Clp protease, ClpP subunit1Inherited
Preprotein translocase SecE subunit1Inherited
Choline kinase1Inherited
RNB domain-like1Inherited
Cu,Zn superoxide dismutase-like1Inherited
5' nucleotidase-like1Inherited
6-phosphogluconate dehydrogenase-like, N-terminal domain1Inherited
MYND zinc finger1Inherited
Acyl-ACP thioesterase-like1Inherited
alpha-Amylases, C-terminal beta-sheet domain1Inherited
Oxidoreductase molybdopterin-binding domain1Inherited
Ribosomal protein L141Inherited
P-domain of calnexin/calreticulin1Inherited
Dihydrodipicolinate reductase-like1Inherited
Enolase1Inherited
NadC N-terminal domain-like1Inherited
RNase Z-like1Inherited
Adenosine-5'phosphosulfate kinase (APS kinase)1Inherited
RuBisCo LSMT C-terminal, substrate-binding domain1Inherited
AMPK-beta glycogen binding domain-like1Inherited
Tail specific protease, catalytic domain1Inherited
Glyoxalase I (lactoylglutathione lyase)1Inherited
Folylpolyglutamate synthetase1Inherited
Sec63 C-terminal domain-like1Inherited
RelA/SpoT domain1Inherited
GroES1Inherited
Alpha subunit of glutamate synthase, C-terminal domain1Inherited
Class I alpha-1;2-mannosidase, catalytic domain1Inherited
Smc hinge domain1Inherited
Succinyl-CoA synthetase domains1Inherited
Cdc48 N-terminal domain-like1Inherited
monodomain cytochrome c1Inherited
Peptide methionine sulfoxide reductase1Inherited
GroEL-like chaperone, intermediate domain1Inherited
LEA14-like1Inherited
Group II chaperonin (CCT, TRIC), ATPase domain1Inherited
Zn-finger domain of Sec23/241Inherited
Cytochrome p450 reductase N-terminal domain-like1Inherited
IPP isomerase-like1Inherited
Prolyl oligopeptidase, C-terminal domain1Inherited
Signal peptide-binding domain1Inherited
D-ribulose-5-phosphate 3-epimerase1Inherited
NadC C-terminal domain-like1Inherited
2Fe-2S ferredoxin-related1Inherited
Sedlin (SEDL)1Inherited
Head domain of nucleotide exchange factor GrpE1Inherited
Ribosomal protein L31Inherited
Plant transcriptional regulator PBF-21Inherited
Ribosomal protein L10-like1Inherited
Ribosomal protein L19 (L19e)1Inherited
Poly(ADP-ribose) polymerase, C-terminal domain1Inherited
NHL repeat1Inherited
CAT-like1Inherited
Ribosomal protein L39e1Inherited
Class I aldolase1Inherited
Molybdenum-containing oxidoreductases-like dimerisation domain1Inherited
Calnexin/calreticulin1Inherited
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain1Inherited
WrbA-like1Inherited
GroEL chaperone, ATPase domain1Inherited
Hypothetical protein YjiA, C-terminal domain1Inherited
BphP N-terminal domain-like1Inherited
eIF1-like1Inherited
Biotinyl/lipoyl-carrier proteins and domains1Inherited
PhzC/PhzF-like1Inherited
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor1Inherited
Prokaryotic type I DNA topoisomerase1Inherited
ATP sulfurylase catalytic domain1Inherited
PUA domain1Inherited
PCI domain (PINT motif)1Inherited
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain1Inherited
N-acetyl-l-glutamate kinase1Inherited
Phytochrome-specific domain1Inherited
Ribosomal protein L37e1Inherited
EDF1-like1Inherited
Ribosomal protein S21Inherited
Glyoxalase II (hydroxyacylglutathione hydrolase)1Inherited
Pentapeptide repeats1Inherited
Tetrapyrrole methylase1Inherited
FKBP immunophilin/proline isomerase1Inherited
XPC-binding domain1Inherited
Phosphoglucomutase, first 3 domains1Inherited
beta-sandwich domain of Sec23/241Inherited
Phosphoglycerate kinase1Inherited
Helical domain of Sec23/241Inherited
Molybdenum cofactor biosynthesis protein MoeB1Inherited
Ribosomal protein L31e1Inherited
NADPH-cytochrome p450 reductase FAD-binding domain-like1Inherited
eIF5a N-terminal domain-like1Inherited
Leukotriene A4 hydrolase catalytic domain1Inherited
Sec63 N-terminal domain1Inherited
Canonical RBD1Inherited
YicI N-terminal domain-like1Inherited

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FAH1Inherited
Peptide methionine sulfoxide reductase1Inherited
Ribosomal protein L131Inherited
Ribosomal protein L16p/L10e1Inherited
BolA-like1Inherited
Nicotinate/Quinolinate PRTase C-terminal domain-like1Inherited
Lipocalins1Inherited
Composite domain of metallo-dependent hydrolases1Inherited
Electron transport accessory proteins1Inherited
Preprotein translocase SecE subunit1Inherited
Metallo-dependent hydrolases1Inherited
Expressed protein At2g23090/F21P24.151Inherited
LeuD/IlvD-like1Inherited
FF domain1Inherited
Tautomerase/MIF1Inherited
eIF1-like1Inherited
Mitochondrial carrier1Inherited
FKBP-like1Inherited
Ribosomal protein S61Inherited
Ribosomal protein L30p/L7e1Inherited
Diaminopimelate epimerase-like1Inherited
E2F-DP heterodimerization region1Inherited
Alpha subunit of glutamate synthase, C-terminal domain1Inherited
LuxS/MPP-like metallohydrolase1Inherited
lambda repressor-like DNA-binding domains1Inherited
Ribosomal protein S21Inherited
Nucleotidylyl transferase1Inherited
Peptidase/esterase 'gauge' domain1Inherited
Seven-hairpin glycosidases1Inherited
Nicotinate/Quinolinate PRTase N-terminal domain-like1Inherited
Ribosomal protein L41Inherited
Prokaryotic ribosomal protein L171Inherited
GroEL equatorial domain-like1Inherited
TATA-box binding protein-like1Inherited
Ribosomal protein L141Inherited
Chorismate mutase II1Inherited
R3H domain1Inherited
Alpha-L RNA-binding motif1Inherited
Phosphoglycerate kinase1Inherited
Tim10-like1Inherited
Casein kinase II beta subunit1Inherited
XPC-binding domain1Inherited
GroEL-intermediate domain like1Inherited
Cu,Zn superoxide dismutase-like1Inherited
Oxidoreductase molybdopterin-binding domain1Inherited
Phosphoglucomutase, C-terminal domain1Inherited
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex1Inherited
Sigma2 domain of RNA polymerase sigma factors1Inherited
Tetrapyrrole methylase1Inherited
N-terminal domain of the delta subunit of the F1F0-ATP synthase1Inherited
S-adenosylmethionine synthetase1Inherited
Succinyl-CoA synthetase domains1Inherited
RibA-like1Inherited
NHL repeat1Inherited
Hypothetical protein YjiA, C-terminal domain1Inherited
DNA repair protein MutS, domain I1Inherited
RNA-binding domain, RBD1Inherited
Ribosomal proteins S24e, L23 and L15e1Inherited
Tetrahydrobiopterin biosynthesis enzymes-like1Inherited
Cytochrome c1Inherited
ATP synthase (F1-ATPase), gamma subunit1Inherited
DNA repair protein MutS, domain II1Inherited
YrdC/RibB1Inherited
Helical domain of Sec23/241Inherited
CYTH-like phosphatases1Inherited
Sigma3 and sigma4 domains of RNA polymerase sigma factors1Inherited
Folate-binding domain1Inherited
Cryptochrome/photolyase FAD-binding domain1Inherited
MurD-like peptide ligases, catalytic domain1Inherited
Transducin (alpha subunit), insertion domain1Inherited
Ribosomal protein L10-like1Inherited
alpha-helical ferredoxin1Inherited
Ribosomal protein L31e1Inherited
Single hybrid motif1Inherited
Ribosomal protein L19 (L19e)1Inherited
Zn-finger domain of Sec23/241Inherited
C-terminal, gelsolin-like domain of Sec23/241Inherited
Heme-dependent catalase-like1Inherited
Prokaryotic type I DNA topoisomerase1Inherited
GroEL apical domain-like1Inherited
GlnB-like1Inherited
MurD-like peptide ligases, peptide-binding domain1Inherited
ADC-like1Inherited
Dimeric alpha+beta barrel1Inherited
Chelatase1Inherited
Pentapeptide repeat-like1Inherited
LysM domain1Inherited
HesB-like domain1Inherited
Phosphoglucomutase, first 3 domains1Inherited
Putative isomerase YbhE1Inherited
Ligand-binding domain in the NO signalling and Golgi transport1Inherited
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor1Inherited
Ribosomal L11/L12e N-terminal domain1Inherited
Head domain of nucleotide exchange factor GrpE1Inherited
Leukotriene A4 hydrolase N-terminal domain1Inherited
Nitrite and sulphite reductase 4Fe-4S domain-like1Inherited
AMPKBI-like1Inherited
ssDNA-binding transcriptional regulator domain1Inherited
Aconitase iron-sulfur domain1Inherited
S13-like H2TH domain1Inherited
Cdc48 domain 2-like1Inherited
RuBisCo LSMT C-terminal, substrate-binding domain1Inherited
Flavoproteins1Inherited
Ribosomal protein L39e1Inherited
P-domain of calnexin/calreticulin1Inherited
Coiled-coil domain of nucleotide exchange factor GrpE1Inherited
tRNA-binding arm1Inherited
NSFL1 (p97 ATPase) cofactor p47, SEP domain1Inherited
SH3-domain1Inherited
Ribosomal protein L29 (L29p)1Inherited
N-terminal, heterodimerisation domain of RBP7 (RpoE)1Inherited
Signal peptide-binding domain1Inherited
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain1Inherited
Serine metabolism enzymes domain1Inherited
SIS domain1Inherited
RraA-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57863,48403
  • 57863 - ArfGap/RecO-like zinc finger
  • 48403 - Ankyrin repeat
    		• 1Inherited
    46785,158702
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
    		• 1Inherited
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
    		• 1Inherited
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
    		• 1Inherited
    88659,88659
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
    		• 1Inherited
    158702,81296
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
    		• 1Inherited
    54534,48452
  • 54534 - FKBP-like
  • 48452 - TPR-like
    		• 1Inherited
    56524,81296
  • 56524 - Oxidoreductase molybdopterin-binding domain
  • 81296 - E set domains
    		• 1Inherited
    51338,51556
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
    		• 1Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
    		• 1Inherited
    50104,50249
  • 50104 - Translation proteins SH3-like domain
  • 50249 - Nucleic acid-binding proteins
    		• 1Inherited
    53383,53383
  • 53383 - PLP-dependent transferases
  • 53383 - PLP-dependent transferases
    		• 1Inherited
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
    		• 1Inherited
    52540,48403
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
    		• 1Inherited
    81383,54518
  • 81383 - F-box domain
  • 54518 - Tubby C-terminal domain-like
    		• 1Inherited
    158702,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    50022,55961
  • 50022 - ISP domain
  • 55961 - Bet v1-like
    		• 1Inherited
    81995,82919
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
    		• 1Inherited
    47661,58038
  • 47661 - t-snare proteins
  • 58038 - SNARE fusion complex
    		• 1Inherited
    101908,56219
  • 101908 - Putative isomerase YbhE
  • 56219 - DNase I-like
    		• 1Inherited
    88798,50249
  • 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
  • 50249 - Nucleic acid-binding proteins
    		• 1Inherited
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
    		• 1Inherited
    48179,52413
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
    		• 1Inherited
    56112,48371
  • 56112 - Protein kinase-like (PK-like)
  • 48371 - ARM repeat
    		• 1Inherited
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
    		• 1Inherited
    55781,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 1Inherited
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
    		• 1Inherited
    51735,143548
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
    		• 1Inherited
    158639,63748
  • 158639 - ENT-like
  • 63748 - Tudor/PWWP/MBT
    		• 1Inherited
    47592,159042
  • 47592 - SWIB/MDM2 domain
  • 159042 - Plus3-like
    		• 1Inherited
    82199,81822
  • 82199 - SET domain
  • 81822 - RuBisCo LSMT C-terminal, substrate-binding domain
    		• 1Inherited
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    52540,52058
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52058 - L domain-like
    		• 1Inherited
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
    		• 1Inherited
    55785,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
    		• 1Inherited
    103657,50729
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
    		• 1Inherited
    88697,52374
  • 88697 - PUA domain-like
  • 52374 - Nucleotidylyl transferase
    		• 1Inherited
    50729,57863
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
    		• 1Inherited
    50993,53474
  • 50993 - Peptidase/esterase 'gauge' domain
  • 53474 - alpha/beta-Hydrolases
    		• 1Inherited
    52402,52833
  • 52402 - Adenine nucleotide alpha hydrolases-like
  • 52833 - Thioredoxin-like
    		• 1Inherited
    101238,46934
  • 101238 - XPC-binding domain
  • 46934 - UBA-like
    		• 1Inherited
    58014,51064
  • 58014 - Coiled-coil domain of nucleotide exchange factor GrpE
  • 51064 - Head domain of nucleotide exchange factor GrpE
    		• 1Inherited
    54747,46906
  • 54747 - Ribosomal L11/L12e N-terminal domain
  • 46906 - Ribosomal protein L11, C-terminal domain
    		• 1Inherited
    53850,55021
  • 53850 - Periplasmic binding protein-like II
  • 55021 - ACT-like
    		• 1Inherited
    55821,142695
  • 55821 - YrdC/RibB
  • 142695 - RibA-like
    		• 1Inherited
    52540,47446
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
    		• 1Inherited
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
    		• 1Inherited
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
    		• 1Inherited
    52540,90002
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90002 - Hypothetical protein YjiA, C-terminal domain
    		• 1Inherited
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
    		• 1Inherited
    55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
    		• 1Inherited
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
    		• 1Inherited
    53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
    		• 1Inherited
    55874,52172
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
    		• 1Inherited
    81698,81698
  • 81698 - FF domain
  • 81698 - FF domain
    		• 1Inherited
    57850,54928
  • 57850 - RING/U-box
  • 54928 - RNA-binding domain, RBD
    		• 1Inherited
    101690,69065
  • 101690 - PAZ domain
  • 69065 - RNase III domain-like
    		• 1Inherited
    54980,54980
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
    		• 1Inherited
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
    		• 1Inherited
    81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
    		• 1Inherited
    48403,57850
  • 48403 - Ankyrin repeat
  • 57850 - RING/U-box
    		• 1Inherited
    53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
    		• 1Inherited
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
    		• 1Inherited
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
    		• 1Inherited
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
    		• 1Inherited
    50249,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
    		• 1Inherited
    52172,52172
  • 52172 - CheY-like
  • 52172 - CheY-like
    		• 1Inherited
    143548,55021
  • 143548 - Serine metabolism enzymes domain
  • 55021 - ACT-like
    		• 1Inherited
    54909,54909
  • 54909 - Dimeric alpha+beta barrel
  • 54909 - Dimeric alpha+beta barrel
    		• 1Inherited
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
    		• 1Inherited
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 1Inherited
    50156,52096
  • 50156 - PDZ domain-like
  • 52096 - ClpP/crotonase
    		• 1Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
    		• 1Inherited
    102848,54236
  • 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
  • 54236 - Ubiquitin-like
    		• 1Inherited
    88946,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
    		• 1Inherited
    52425,48173
  • 52425 - Cryptochrome/photolyase, N-terminal domain
  • 48173 - Cryptochrome/photolyase FAD-binding domain
    		• 1Inherited
    55021,56112
  • 55021 - ACT-like
  • 56112 - Protein kinase-like (PK-like)
    		• 1Inherited
    53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
    		• 1Inherited
    109604,81301
  • 109604 - HD-domain/PDEase-like
  • 81301 - Nucleotidyltransferase
    		• 1Inherited
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
    		• 1Inherited
    48403,52540
  • 48403 - Ankyrin repeat
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
    		• 1Inherited
    117916,117916
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
    		• 1Inherited
    55781,47384
  • 55781 - GAF domain-like
  • 47384 - Homodimeric domain of signal transducing histidine kinase
    		• 1Inherited
    49899,63887
  • 49899 - Concanavalin A-like lectins/glucanases
  • 63887 - P-domain of calnexin/calreticulin
    		• 1Inherited
    81296,51445
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
    		• 1Inherited
    47473,103506
  • 47473 - EF-hand
  • 103506 - Mitochondrial carrier
    		• 1Inherited
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    81296,52540
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52283,51735,143548
  • 52283 - Formate/glycerate dehydrogenase catalytic domain-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
    		• 1Inherited
    55785,55781,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
    		• 1Inherited
    55781,47384,55874
  • 55781 - GAF domain-like
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
    		• 1Inherited
    55781,55785,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 1Inherited
    52540,52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
    		• 1Inherited
    53738,53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
    		• 1Inherited
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
    		• 1Inherited
    81296,52540,48403
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
    		• 1Inherited
    47384,55874,52172
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
    		• 1Inherited
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
    		• 1Inherited
    46785,158702,52540
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    81698,81698,81698
  • 81698 - FF domain
  • 81698 - FF domain
  • 81698 - FF domain
    		• 1Inherited
    82919,53300,81995
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
    		• 1Inherited
    88946,88659,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
    		• 1Inherited
    51735,143548,55021
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
  • 55021 - ACT-like
    		• 1Inherited
    53738,53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
    		• 1Inherited
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
    		• 1Inherited
    50729,57863,48403
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
  • 48403 - Ankyrin repeat
    		• 1Inherited
    50447,54980,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
    		• 1Inherited
    158702,52540,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    54534,54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 54534 - FKBP-like
    		• 1Inherited
    103657,50729,57863
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
    		• 1Inherited
    55781,55781,55785
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 1Inherited
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
    		• 1Inherited
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    46785,158702,81296
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
    		• 1Inherited
    54534,54534,48452
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 48452 - TPR-like
    		• 1Inherited
    50249,57756,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
    		• 1Inherited
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
    		• 1Inherited
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
    		• 1Inherited
    47364,52540,47446
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
    		• 1Inherited
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 1Inherited
    52540,46785,158702
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
    		• 1Inherited
    51735,48179,52413
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
    		• 1Inherited
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
    		• 1Inherited
    81296,51445,51011
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
  • 51011 - Glycosyl hydrolase domain
    		• 1Inherited
    81995,82919,53300
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
    		• 1Inherited

    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)
    Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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    © Copyright 2013 The SUPERFAMILY authors and Julian Gough.