SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Disease Ontology (DO): epilepsy

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   disease [DOID:4] <8>
+ + + + 4:   disease of anatomical entity [DOID:7] <12>(143|187) (147|103|58)
+ + + 3:   nervous system disease [DOID:863] <11>(51|61) (54|28|13)
+ + 2:   central nervous system disease [DOID:331] <16>(33|44) (36|21|9)
+ 1:   brain disease [DOID:936] <30>(14|18) (15|6|1)
0:   epilepsy [DOID:1826] <7>(5|7) (5|2|0)
- 1:   focal epilepsy [DOID:2234] <6>(5|4) (5|2|0)
- 1:   electroclinical syndrome [DOID:0050701] <5>(2|2) (2|1|0)
- 1:   idiopathic generalized epilepsy [DOID:1827] <3>(0|0) (0|0|0)
- 1:   extratemporal epilepsy [DOID:2544](0|0) (0|0|0)
- 1:   photosensitive epilepsy [DOID:0060281](0|0) (0|0|0)
- 1:   status epilepticus [DOID:1824](0|0) (0|0|0)
- 1:   visual epilepsy [DOID:11832](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Periplasmic binding protein-like I0.000000004319Direct
Voltage-gated potassium channels0.000003961Direct
Periplasmic binding protein-like II0.01909Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.06789Inherited
Nicotinic receptor ligand binding domain-like0.06789Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
L-arabinose binding protein-like0.0000002468Direct
Phosphate binding protein-like0.000001143Direct
ABC transporter transmembrane region0.0001284Direct
Calmodulin-like0.0006348Direct
Tetramerization domain of potassium channels0.0007959Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0409Inherited
Nicotinic receptor ligand binding domain-like0.0409Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Periplasmic binding protein-like I0.000000002016Direct
Voltage-gated potassium channels0.000002117Direct
Periplasmic binding protein-like II0.0138Inherited
Nicotinic receptor ligand binding domain-like0.05259Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.05259Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81324,53850
  • 81324 - Voltage-gated potassium channels
  • 53850 - Periplasmic binding protein-like II
  • 0.0000079Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.05259Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)