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Disease Ontology (DO): kidney cancer

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   disease [DOID:4] <8>
+ + + + 4:   disease of cellular proliferation [DOID:14566] <3>(123|191) (129|118|56)
+ + + 3:   cancer [DOID:162] <2>(115|181) (120|113|54)
+ + 2:   organ system cancer [DOID:0050686] <14>(66|106) (72|58|31)
+ 1:   urinary system cancer [DOID:3996] <4>(7|9) (9|11|7)
0:   kidney cancer [DOID:263] <8>(6|8) (8|10|7)
- 1:   nephroblastoma [DOID:2154] <7>(1|1) (2|0|0)
- 1:   kidney sarcoma [DOID:4242] <4>(0|0) (0|0|0)
- 1:   renal pelvis carcinoma [DOID:4919] <3>(0|0) (0|0|0)
- 1:   childhood kidney neoplasm [DOID:3675] <2>(0|0) (0|0|0)
- 1:   mesoblastic nephroma [DOID:4772] <1>(0|0) (0|0|0)
- 1:   renal carcinoma [DOID:4451] <1>(4|6) (5|7|6)
- 1:   kidney hemangiopericytoma [DOID:262](0|0) (0|0|0)
- 1:   malignant cystic nephroma [DOID:7571](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Growth factor receptor domain0.0000003709Direct
Notch domain0.00001414Direct
Thyroglobulin type-1 domain0.000213Direct
PGBD-like0.0003238Direct
TIMP-like0.001723Inherited
Nuclear receptor ligand-binding domain0.9655Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Growth factor receptor domain0.00000001507Direct
Notch domain0.00001054Direct
Thyroglobulin type-1 domain0.000178Direct
MMP N-terminal domain0.0002698Direct
Matrix metalloproteases, catalytic domain0.0007637Direct
Extracellular domain of cell surface receptors0.002259Inherited
Fatty acid binding protein-like0.812Inherited
Nuclear receptor ligand-binding domain0.9397Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Growth factor receptor domain0.0000001879Direct
Notch domain0.000007799Direct
Thyroglobulin type-1 domain0.0001277Direct
PGBD-like0.0001957Direct
TIMP-like0.001106Inherited
p53-like transcription factors0.002862Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.8764Inherited
Nuclear receptor ligand-binding domain0.8972Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0Direct
    57184,57610
  • 57184 - Growth factor receptor domain
  • 57610 - Thyroglobulin type-1 domain
  • 0.00003801Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.0001957Direct
    57184,57603
  • 57184 - Growth factor receptor domain
  • 57603 - FnI-like domain
  • 0.0003947Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.0003947Direct
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0007853Direct
    50729,55550
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 0.0009848Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0009848Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0009848Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0Direct
    50729,55550,56112
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0001003Direct
    55550,56112,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 56112 - Protein kinase-like (PK-like)
  • 0.0001003Direct
    57184,57196,57184
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0003947Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.0004742Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0009848Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.001634Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)