SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Disease Ontology (DO): early myoclonic encephalopathy

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: DO Hierarchy (disease ontology from University of Maryland)

Shortest distance to current term (+ for parents, - for children) DO term [DO ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   disease [DOID:4] <8>
+ + + + + + + 7:   disease of anatomical entity [DOID:7] <12>(143|187) (147|103|58)
+ + + + + + 6:   nervous system disease [DOID:863] <11>(51|61) (54|28|13)
+ + + + + 5:   central nervous system disease [DOID:331] <16>(33|44) (36|21|9)
+ + + + 4:   brain disease [DOID:936] <30>(14|18) (15|6|1)
+ + + 3:   epilepsy [DOID:1826] <7>(5|7) (5|2|0)
+ + 2:   electroclinical syndrome [DOID:0050701] <5>(2|2) (2|1|0)
+ 1:   neonatal period electroclinical syndrome [DOID:0050702] <4>(2|2) (2|1|0)
0:   early myoclonic encephalopathy [DOID:308](2|2) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0.00001144Direct
Nicotinic receptor ligand binding domain-like0.00001144Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0.000004038Direct
Nicotinic receptor ligand binding domain-like0.000004038Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nicotinic receptor ligand binding domain-like0.000006289Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000006289Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000006289Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)