SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Fly Anatomy (FA): extended germ band embryo

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: FA Hierarchy (fly anatomy from FlyBase anatomy ontology)

Shortest distance to current term (+ for parents, - for children) FA term [FA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   anatomical entity [FBbt:99999999] <4>
+ + + + + 5:   material anatomical entity [FBbt:00007016] <6>(240|245) (239|100|32)
+ + + + 4:   anatomical structure [FBbt:00007001] <6>(240|245) (239|100|32)
+ + + 3:   multicellular structure [FBbt:00100313] <96>(235|240) (235|100|31)
+ + 2:   organism [FBbt:00000001] <12>(200|210) (201|92|30)
+ 1:   embryo [FBbt:00000052] <17>(29|31) (31|15|9)
0:   extended germ band embryo [FBbt:00005321] <17>(7|9) (7|5|3)
- 1:   late extended germ band embryo [FBbt:00004450] <56>(3|6) (3|4|2)
- 1:   early extended germ band embryo [FBbt:00014201] <19>(2|2) (2|1|2)
- 1:   central brain primordium [FBbt:00005542] <12>(0|0) (0|0|0)
- 1:   ventral nerve cord primordium [FBbt:00005554] <7>(2|1) (2|0|0)
- 1:   ring gland primordium [FBbt:00017009] <3>(0|0) (0|0|0)
- 1:   stomodeal invagination [FBbt:00005326] <2>(1|1) (1|0|0)
- 1:   dorsal head epidermis primordium [FBbt:00015247] <1>(0|0) (0|0|0)
- 1:   antennal primordium [FBbt:00005510](0|0) (0|0|0)
- 1:   anterior midgut primordium [FBbt:00000444](1|1) (1|0|0)
- 1:   cycle 15 embryo [FBbt:00005315](0|0) (0|0|0)
- 1:   dorsal ridge primordium [FBbt:00016018](0|0) (0|0|0)
- 1:   germ band [FBbt:00000102](0|0) (0|0|0)
- 1:   lateral head epidermis primordium [FBbt:00014203](0|0) (0|0|0)
- 1:   metameric furrow [FBbt:00000101](0|0) (0|0|0)
- 1:   pole cell [FBbt:00000092](1|0) (1|0|0)
- 1:   salivary gland body primordium [FBbt:00005512](0|0) (0|0|0)
- 1:   ventral head epidermis primordium [FBbt:00015255](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cytokine0Direct
Homeodomain-like0.0004444Direct
lambda repressor-like DNA-binding domains0.000917Direct
Integrin domains0.02785Inherited
PAZ domain0.02785Inherited
EGF/Laminin0.04141Inherited
Growth factor receptor domain0.07693Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Fibroblast growth factors (FGF)0Direct
Laminin-type module0Direct
Integrin domains0Direct
Cell cycle control phosphatase, catalytic domain0Direct
Homeodomain0.00005244Direct
EGF-type module0.02435Inherited
Growth factor receptor domain0.02912Inherited
I set domains0.05228Inherited
Forkhead DNA-binding domain0.105Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cytokine0Direct
Homeodomain-like0.0003262Direct
lambda repressor-like DNA-binding domains0.0006638Direct
PAZ domain0.02168Inherited
Integrin domains0.02168Inherited
EGF/Laminin0.03265Inherited
Growth factor receptor domain0.06323Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0006638Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.0006638Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.06116Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.1281Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.2493Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0002572Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.02168Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.08022Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)