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Phenotypic Abnormality (PA): Neoplasm of the genitourinary tract

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Neoplasm [HP:0002664] <2>(20|21) (23|8|3)
+ 1:   Neoplasm by anatomical site [HP:0011793] <24>(18|19) (20|7|2)
+ 1:   Abnormality of the genitourinary system [HP:0000119] <5>(73|72) (80|28|9)
0:   Neoplasm of the genitourinary tract [HP:0007379] <4>(7|6) (9|2|1)
- 1:   Genital neoplasm [HP:0010787] <6>(6|5) (7|2|0)
- 1:   Urinary tract neoplasm [HP:0010786] <4>(2|3) (3|1|1)
- 1:   Benign genitourinary tract neoplasm [HP:0006778](0|0) (0|0|0)
- 1:   Malignant genitourinary tract tumor [HP:0006758](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.0008422Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.002381Inherited
Ribosomal protein S5 domain 2-like0.00902Inherited
BRCT domain0.01163Inherited
Nuclear receptor ligand-binding domain0.03248Inherited
Protein kinase-like (PK-like)0.04664Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.2294Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.00006838Direct
DNA gyrase/MutL, N-terminal domain0.00006838Direct
DNA repair protein MutS, domain III0.0006119Direct
POU-specific domain0.002226Inherited
Nuclear receptor ligand-binding domain0.02961Inherited
ABC transporter ATPase domain-like0.1288Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.0004408Direct
RING/U-box0.00124Inherited
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.001354Inherited
lambda repressor-like DNA-binding domains0.00398Inherited
Ribosomal protein S5 domain 2-like0.005765Inherited
BRCT domain0.007559Inherited
Nuclear receptor ligand-binding domain0.02293Inherited
Protein kinase-like (PK-like)0.03407Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.1942Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.00004306Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0004408Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.004452Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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