SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Abnormality of jaw muscles

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Abnormality of head or neck [HP:0000152] <2>(86|104) (97|58|38)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormality of the head [HP:0000234] <6>(85|102) (96|57|38)
+ + + 3:   Abnormality of the face [HP:0000271] <14>(70|85) (82|46|31)
+ + + 3:   Abnormality of the musculature [HP:0003011] <3>(64|83) (70|33|9)
+ + 2:   Abnormal skeletal muscle morphology [HP:0011805] <38>(30|36) (35|14|4)
+ + 2:   Abnormality of facial soft tissue [HP:0011799] <7>(2|3) (4|3|0)
+ 1:   Abnormality of facial musculature [HP:0000301] <12>(2|3) (4|3|0)
0:   Abnormality of jaw muscles [HP:0045037] <2>(2|2) (2|1|0)
- 1:   Abnormality of masticatory muscle [HP:0410011] <4>(0|0) (0|0|0)
- 1:   Jaw hyporeflexia [HP:0012392](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0.000001691Direct
Nicotinic receptor ligand binding domain-like0.000001691Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0.0000006847Direct
Nicotinic receptor ligand binding domain-like0.0000006847Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nicotinic receptor ligand binding domain-like0.0000006801Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000006801Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.0000006801Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)