SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Nausea and vomiting

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|47|25)
+ + 2:   Abnormality of digestive system physiology [HP:0025032] <5>(29|32) (37|14|1)
+ 1:   Abdominal symptom [HP:0011458] <12>(17|20) (21|8|1)
0:   Nausea and vomiting [HP:0002017] <2>(5|9) (6|3|0)
- 1:   Vomiting [HP:0002013] <3>(4|5) (4|1|0)
- 1:   Nausea [HP:0002018](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
MHC antigen-recognition domain0.00001997Direct
4Fe-4S ferredoxins0.001286Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.002377Inherited
Acyl-CoA dehydrogenase NM domain-like0.002377Inherited
Adenine nucleotide alpha hydrolases-like0.04629Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Serum paraoxonase/arylesterase 1, PON10Direct
MHC antigen-recognition domain0.00001564Direct
DNA gyrase/MutL, second domain0.0001163Direct
DNA gyrase/MutL, N-terminal domain0.0001163Direct
Medium chain acyl-CoA dehydrogenase-like, C-terminal domain0.001884Inherited
Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains0.001884Inherited
BC N-terminal domain-like0.007425Inherited
BC ATP-binding domain-like0.007425Inherited
Nitrogenase iron protein-like0.03309Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
MHC antigen-recognition domain0.000008629Direct
Calcium-dependent phosphotriesterase0.000695Direct
4Fe-4S ferredoxins0.000695Direct
Acyl-CoA dehydrogenase NM domain-like0.001351Inherited
Acyl-CoA dehydrogenase C-terminal domain-like0.001351Inherited
Adenine nucleotide alpha hydrolases-like0.03379Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.000008629Direct
    55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.00007879Direct
    56645,47203
  • 56645 - Acyl-CoA dehydrogenase NM domain-like
  • 47203 - Acyl-CoA dehydrogenase C-terminal domain-like
  • 0.001351Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)