SUPERFAMILY 1.75 HMM library and genome assignments server

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Phenotypic Abnormality (PA): Breast carcinoma

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the breast [HP:0000769] <2>(5|5) (5|0|0)
+ + + 3:   Neoplasm [HP:0002664] <2>(20|21) (23|8|3)
+ + 2:   Neoplasm by anatomical site [HP:0011793] <24>(18|19) (20|7|2)
+ + 2:   Abnormal breast morphology [HP:0031093] <8>(5|5) (5|0|0)
+ 1:   Neoplasm of the breast [HP:0100013] <4>(2|3) (2|0|0)
0:   Breast carcinoma [HP:0003002] <1>(2|3) (2|0|0)
- 1:   Multifocal breast carcinoma [HP:0006625](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
BRCT domain0.0001922Direct
Ribonuclease H-like0.0008246Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
RecA protein-like (ATPase-domain)0.000004586Direct
Phoshoinositide 3-kinase (PI3K), catalytic domain0.00006748Direct
RING finger domain, C3HC40.0002374Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
BRCT domain0.00009181Direct
Ribonuclease H-like0.0004305Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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