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Phenotypic Abnormality (PA): Functional abnormality of the gastrointestinal tract

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + 2:   Abnormality of the digestive system [HP:0025031] <6>(67|77) (77|47|25)
+ 1:   Abnormality of the gastrointestinal tract [HP:0011024] <3>(24|27) (28|14|4)
+ 1:   Abnormality of digestive system physiology [HP:0025032] <5>(29|32) (37|14|1)
0:   Functional abnormality of the gastrointestinal tract [HP:0012719] <11>(10|11) (14|2|0)
- 1:   Gastrointestinal hemorrhage [HP:0002239] <5>(3|5) (4|1|0)
- 1:   Abnormality of esophagus physiology [HP:0025270] <3>(2|2) (3|0|0)
- 1:   Gastrointestinal inflammation [HP:0004386] <3>(2|1) (4|0|0)
- 1:   Gastrointestinal obstruction [HP:0004796] <3>(1|1) (1|0|0)
- 1:   Recurrent infection of the gastrointestinal tract [HP:0004798] <3>(0|0) (0|0|0)
- 1:   Abnormal gastrointestinal motility [HP:0030895] <2>(2|2) (2|1|0)
- 1:   Unusual gastrointestinal infection [HP:0032166] <2>(0|0) (0|0|0)
- 1:   Peptic ulcer [HP:0004398] <1>(0|0) (0|0|0)
- 1:   Achlorhydria [HP:0032448](0|0) (0|0|0)
- 1:   Gastrointestinal infarctions [HP:0005244](0|0) (0|0|0)
- 1:   Odynophagia [HP:0032043](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
beta-sandwich domain of Sec23/240.01475Inherited
RNI-like0.01502Inherited
Immunoglobulin0.08166Inherited
Ran binding protein zinc finger-like0.3388Inherited
Integrin domains0.4606Inherited
Actin-like ATPase domain0.4783Inherited
DEATH domain0.5682Inherited
L domain-like0.7127Inherited
Intermediate filament protein, coiled coil region0.8821Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
DNA gyrase/MutL, second domain0.00208Inherited
DNA gyrase/MutL, N-terminal domain0.00208Inherited
SNARE fusion complex0.02458Inherited
Transforming growth factor (TGF)-beta0.05724Inherited
28-residue LRR0.06574Inherited
Actin/HSP700.1289Inherited
Ran binding protein zinc finger-like0.3083Inherited
Ngr ectodomain-like0.3857Inherited
Integrin domains0.4306Inherited
Intermediate filament protein, coiled coil region0.8755Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
beta-sandwich domain of Sec23/240.009791Inherited
RNI-like0.009981Inherited
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.02Inherited
SNARE fusion complex0.02277Inherited
Snake toxin-like0.04655Inherited
Immunoglobulin0.06307Inherited
4-helical cytokines0.1281Inherited
Ran binding protein zinc finger-like0.2973Inherited
Integrin domains0.4168Inherited
Actin-like ATPase domain0.4344Inherited
DEATH domain0.525Inherited
L domain-like0.6741Inherited
Intermediate filament protein, coiled coil region0.852Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.001833Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.2724Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)