SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal temporal lobe morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   mammalian phenotype [MP:0000001] <29>
+ + + + + + 6:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + + + 5:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + + + 4:   abnormal brain morphology [MP:0002152] <24>(25|42) (35|24|14)
+ + + 3:   abnormal forebrain morphology [MP:0000783] <8>(18|26) (24|15|8)
+ + 2:   abnormal telencephalon morphology [MP:0000787] <9>(15|22) (19|12|6)
+ 1:   abnormal cerebral hemisphere morphology [MP:0008540] <9>(8|12) (10|8|4)
0:   abnormal temporal lobe morphology [MP:0000801] <4>(7|8) (8|5|2)
- 1:   abnormal hippocampus morphology [MP:0000807] <12>(7|8) (8|5|2)
- 1:   abnormal auditory cortex morphology [MP:0004631] <2>(0|0) (0|0|0)
- 1:   abnormal parahippocampal gyrus morphology [MP:0004168] <1>(0|0) (0|0|0)
- 1:   abnormal superior temporal gyrus morphology [MP:0000802](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Doublecortin (DC)0.001442Inherited
SH3-domain0.154Inherited
Composite domain of metallo-dependent hydrolases0.2401Inherited
Metallo-dependent hydrolases0.2401Inherited
Sema domain0.4788Inherited
Plexin repeat0.6096Inherited
Homeodomain-like0.7221Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
beta-glycanases0.00005771Direct
Doublecortin (DC)0.001069Inherited
SH3-domain0.1497Inherited
Hydantoinase (dihydropyrimidinase)0.2182Inherited
Hydantoinase (dihydropyrimidinase), catalytic domain0.2182Inherited
Sema domain0.4672Inherited
Homeodomain0.48Inherited
Plexin repeat0.6013Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Doublecortin (DC)0.0008069Direct
SH3-domain0.1223Inherited
Metallo-dependent hydrolases0.2005Inherited
Composite domain of metallo-dependent hydrolases0.2005Inherited
Sema domain0.4312Inherited
E set domains0.5642Inherited
Plexin repeat0.5642Inherited
Homeodomain-like0.6824Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 0.0008069Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0.2005Inherited
    51338,51556
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 0.2005Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.4312Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.5945Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    51338,51556,51338
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0.2005Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.5945Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)