SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Mammalian Phenotype (MP): split cervical axis

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   mammalian phenotype [MP:0000001] <29>
+ + + + + + + + 8:   skeleton phenotype [MP:0005390] <2>(46|63) (50|41|26)
+ + + + + + + 7:   abnormal skeleton morphology [MP:0005508] <15>(41|59) (47|38|25)
+ + + + + + 6:   abnormal axial skeleton morphology [MP:0002114] <4>(24|40) (25|21|14)
+ + + + + 5:   abnormal vertebral column morphology [MP:0004703] <9>(14|16) (15|11|5)
+ + + + 4:   abnormal vertebrae morphology [MP:0000137] <15>(10|10) (11|5|1)
+ + + 3:   abnormal presacral vertebrae morphology [MP:0000459] <5>(7|8) (7|4|1)
+ + 2:   abnormal cervical vertebrae morphology [MP:0003048] <7>(3|4) (3|2|0)
+ 1:   abnormal cervical axis morphology [MP:0004608] <4>(2|2) (2|1|0)
0:   split cervical axis [MP:0010703](2|2) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Nuclear receptor ligand-binding domain0.0000007684Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002038Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Nuclear receptor0.0000005363Direct
Nuclear receptor ligand-binding domain0.0000006336Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nuclear receptor ligand-binding domain0.0000003123Direct
Glucocorticoid receptor-like (DNA-binding domain)0.000009146Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.0000000597Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)