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Worm Phenotype (WP): cell ionizing radiation response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + 4:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + + 3:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ + 2:   organism stress response variant [WBPhenotype:0000067] <20>(75|63) (76|26|7)
+ + 2:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(60|54) (60|23|12)
+ 1:   organism ionizing radiation response variant [WBPhenotype:0000686] <4>(10|5) (10|0|0)
+ 1:   cell stress response variant [WBPhenotype:0000142] <12>(20|17) (20|7|3)
0:   cell ionizing radiation response variant [WBPhenotype:0001324] <4>(9|5) (9|0|0)
- 1:   cell gamma ray response variant [WBPhenotype:0001326] <4>(3|2) (3|0|0)
- 1:   germ cell ionizing radiation response variant [WBPhenotype:0000712] <2>(6|3) (6|0|0)
- 1:   X ray induced mitotic germ cell arrest defective [WBPhenotype:0002179](0|0) (0|0|0)
- 1:   break induced focus formation variant [WBPhenotype:0001377](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RBP11-like subunits of RNA polymerase0Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0000000001245Direct
Di-copper centre-containing domain0.00000003964Direct
Hect, E3 ligase catalytic domain0.00003851Direct
RING/U-box0.000413Direct
Saposin0.002544Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.005204Inherited
Metallo-dependent phosphatases0.09132Inherited
PLP-dependent transferases0.245Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
RNA-polymerase beta0Direct
Arginine methyltransferase0Direct
Hemocyanin middle domain0.0000002962Direct
Hect, E3 ligase catalytic domain0.00003187Direct
RING finger domain, C3HC40.01113Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RBP11-like subunits of RNA polymerase0Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0000000000986Direct
Di-copper centre-containing domain0.00000003171Direct
Hect, E3 ligase catalytic domain0.00003147Direct
RING/U-box0.000341Direct
Saposin0.002143Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.004423Inherited
Metallo-dependent phosphatases0.08222Inherited
PLP-dependent transferases0.2274Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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