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Worm Phenotype (WP): transgene silencing variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + 2:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ 1:   maintenance of gene silencing variant [WBPhenotype:0002063] <4>(11|8) (11|2|0)
0:   transgene silencing variant [WBPhenotype:0001593] <2>(4|3) (4|0|0)
- 1:   germline transgene silencing variant [WBPhenotype:0001594](2|1) (2|0|0)
- 1:   somatic transgene silencing variant [WBPhenotype:0001595](2|3) (2|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
"Winged helix" DNA-binding domain0.1394Inherited
Ribonuclease H-like0.5247Inherited
Chromo domain-like0.6934Inherited
PAZ domain0.7424Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Linker histone H1/H50.1214Inherited
Armadillo repeat0.1935Inherited
PAZ domain0.8258Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
"Winged helix" DNA-binding domain0.1269Inherited
Ribonuclease H-like0.5028Inherited
Chromo domain-like0.6724Inherited
PAZ domain0.7226Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)