SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Worm Phenotype (WP): cell cell contacts abnormal

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ 1:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
0:   cell cell contacts abnormal [WBPhenotype:0002404] <1>(2|1) (2|0|0)
- 1:   cell cell contacts abnormal early emb [WBPhenotype:0001117] <1>(2|1) (2|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Nucleic acid-binding proteins0.002057Inherited
P-loop containing nucleoside triphosphate hydrolases0.006432Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Extended AAA-ATPase domain0.00003056Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleic acid-binding proteins0.001726Inherited
P-loop containing nucleoside triphosphate hydrolases0.005483Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)