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Worm Phenotype (WP): meiotic progression during oogenesis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + 5:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(57|57) (58|22|4)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(38|40) (38|15|2)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <7>(54|57) (55|22|4)
+ 1:   oogenesis variant [WBPhenotype:0000186] <5>(33|34) (33|14|2)
0:   meiotic progression during oogenesis variant [WBPhenotype:0000313] <2>(26|28) (26|12|2)
- 1:   meiotic progression prophase variant [WBPhenotype:0001824] <4>(24|23) (24|11|2)
- 1:   oocyte meiotic maturation variant [WBPhenotype:0000105] <1>(1|2) (1|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL-intermediate domain like0.0000000001009Direct
GroEL equatorial domain-like0.0000000001009Direct
GroEL apical domain-like0.0000000004842Direct
Sm-like ribonucleoproteins0.00000001465Direct
Translation proteins SH3-like domain0.0000002022Direct
Nucleic acid-binding proteins0.000004856Direct
L30e-like0.00002306Direct
F1F0 ATP synthase subunit C0.00002757Direct
Ribosomal proteins S24e, L23 and L15e0.00002757Direct
S15/NS1 RNA-binding domain0.00002757Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00007681Direct
Translational machinery components0.00007791Direct
"Winged helix" DNA-binding domain0.0001727Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0005511Direct
Nucleotidylyl transferase0.005528Inherited
Histone-fold0.03Inherited
POZ domain0.03009Inherited
CCCH zinc finger0.03359Inherited
Class II aaRS and biotin synthetases0.2513Inherited
Translation proteins0.2513Inherited
Ribosomal protein S5 domain 2-like0.3146Inherited
Protein kinase-like (PK-like)0.8073Inherited
SNARE-like0.8111Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00000000004619Direct
Proteasome subunits0.00000000007897Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000003959Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000001286Direct
RecA protein-like (ATPase-domain)0.00000269Direct
Anticodon-binding domain0.00001009Direct
Translational machinery components0.00002229Direct
Extended AAA-ATPase domain0.00002532Direct
L30e/L7ae ribosomal proteins0.00004701Direct
F1F0 ATP synthase subunit C0.00004701Direct
Pumilio repeat0.00008985Direct
Cold shock DNA-binding domain-like0.0001121Direct
Elongation factors0.0002188Direct
Clathrin adaptor core protein0.0002896Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0009274Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.001461Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.002011Inherited
Nitrogenase iron protein-like0.002177Inherited
BTB/POZ domain0.03764Inherited
CCCH zinc finger0.05374Inherited
Nucleosome core histones0.08035Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.2692Inherited
G proteins0.3046Inherited
Protein kinases, catalytic subunit0.8619Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL equatorial domain-like0.00000000007986Direct
GroEL-intermediate domain like0.00000000007986Direct
GroEL apical domain-like0.000000000384Direct
Sm-like ribonucleoproteins0.00000001169Direct
Translation proteins SH3-like domain0.0000001624Direct
Nucleic acid-binding proteins0.000003947Direct
L30e-like0.0000188Direct
F1F0 ATP synthase subunit C0.00002251Direct
Ribosomal proteins S24e, L23 and L15e0.00002251Direct
S15/NS1 RNA-binding domain0.00002251Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00006285Direct
Translational machinery components0.00006376Direct
"Winged helix" DNA-binding domain0.0001418Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0004564Direct
Nucleotidylyl transferase0.004702Inherited
Histone-fold0.02634Inherited
POZ domain0.02642Inherited
CCCH zinc finger0.02955Inherited
Class II aaRS and biotin synthetases0.2335Inherited
Translation proteins0.2335Inherited
Ribosomal protein S5 domain 2-like0.2952Inherited
Protein kinase-like (PK-like)0.7891Inherited
SNARE-like0.793Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000000007986Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000007986Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000004803Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.00002251Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.00005213Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.0001409Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004564Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0004741Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.005993Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.03705Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000007986Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004564Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)