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Worm Phenotype (WP): no differentiated gametes

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + 4:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + + 3:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
+ + 2:   gametogenesis variant [WBPhenotype:0000774] <2>(57|57) (58|22|4)
+ 1:   germ cell differentiation variant [WBPhenotype:0000894] <3>(38|40) (38|15|2)
0:   no differentiated gametes [WBPhenotype:0000395] <2>(7|9) (7|3|1)
- 1:   no oocytes [WBPhenotype:0000291](7|9) (7|3|1)
- 1:   sperm absent [WBPhenotype:0000290](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Smc hinge domain0.00001963Direct
Nucleic acid-binding proteins0.008513Inherited
"Winged helix" DNA-binding domain0.08103Inherited
Sm-like ribonucleoproteins0.2401Inherited
GroEL-intermediate domain like0.3488Inherited
GroEL equatorial domain-like0.3488Inherited
GroEL apical domain-like0.3488Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.000000436Direct
Smc hinge domain0.00001109Direct
Ubiquitin-related0.007062Inherited
Cyclin0.01713Inherited
Cold shock DNA-binding domain-like0.03006Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.06286Inherited
Pumilio repeat0.2459Inherited
Group II chaperonin (CCT, TRIC), apical domain0.5046Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.5046Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Smc hinge domain0.000016Direct
Nucleic acid-binding proteins0.007297Inherited
"Winged helix" DNA-binding domain0.07272Inherited
Sm-like ribonucleoproteins0.2225Inherited
GroEL equatorial domain-like0.3288Inherited
GroEL apical domain-like0.3288Inherited
GroEL-intermediate domain like0.3288Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03899Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.3288Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.3288Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.3288Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)