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Worm Phenotype (WP): cell morphology variant
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Phenotype Ontology
Like Gene Ontology (GO), phenotypy ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Phenotype ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology (DO) DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology (HP) HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology (MP) MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology (WP) WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology (YP) Based on YP which is the major contributor to the Ascomycete phenotype ontology, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology (FP) FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology (FA) FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology (ZA) ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology (XA) XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology (AP) As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology (EC) Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- DrugBank ATC (DB) Ontology (DB) In the Anatomical Therapeutic Chemical (ATC) classification system, drugs are classified in groups at five different levels according to the organ or system (1st level, anatomical main group) on which they act and their therapeutic (2nd level, therapeutic subgroup), pharmacological (3rd level, pharmacological subgroup) and chemical properties (4th level, chemical subgroup; 5th level, chemical substance). Only drugs in DrugBank are considered.
- UniProtKB KeyWords (KW) Ontology (KW) Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- UniProtKB UniPathway (UP) Ontology (UP) UP is a fully manually curated resource for the representation and annotation of metabolic pathways, being used as controlled vocabulary for pathway annotation in UniProtKB.
Structural Domain Phenotype Ontology and its Annotations
Structural Classification of Proteins (SCOP) classifies evolutionary-related domains into Superfamily level and Family level. Using the phenotype ontologies above, we have generated the domain-centric phenotype annotations, and further identified those phenotype terms which are the most informative to annotate SCOP domains. Promisingly, domain-centric phenotypic annotations can serve as an alternative starting point to explore genotype-phenotype relationships. We provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Structural Domain Disease Ontology (DO) Ontology (SDDO) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DO.txt, and the corresponding ontology:SDDO.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Human Phenotype (HP) Ontology (SDHP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2HP.txt, and the corresponding ontology:SDHP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Mouse Phenotype (MP) Ontology (SDMP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2MP.txt, and the corresponding ontology:SDMP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Worm Phenotype (WP) Ontology (SDWP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2WP.txt, and the corresponding ontology:SDWP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Yeast Phenotype (YP) Ontology (SDYP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2YP.txt, and the corresponding ontology:SDYP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Phenotype (FP) Ontology (SDFP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FP.txt, and the corresponding ontology:SDFP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Fly Anatomy (FA) Ontology (SDFA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2FA.txt, and the corresponding ontology:SDFA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Zebrafish Anatomy (ZA) Ontology (SDZA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2ZA.txt, and the corresponding ontology:SDZA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Xenopus Anatomy (XA) Ontology (SDXA) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2XA.txt, and the corresponding ontology:SDXA.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Arabidopsis Plant Ontology (AP) Ontology (SDAP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2AP.txt, and the corresponding ontology:SDAP.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain Enzyme Commission (EC) Ontology (SDEC) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2EC.txt, and the corresponding ontology:SDEC.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain DrugBank ATC (DB) Ontology (SDDB) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2DB.txt, and the corresponding ontology:SDDB.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB KeyWords (KW) Ontology (SDKW) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2KW.txt, and the corresponding ontology:SDKW.txt) and mysql tables (Domain2PO.sql.gz).
- Structural Domain UniProtKB UniPathway (UP) Ontology (SDUP) and its Annotations: For details, please visit Document: PO annotation for SCOP domains, wherein Data Availability contains parsable flat files (the annotation:Domain2UP.txt, and the corresponding ontology:SDUP.txt) and mysql tables (Domain2PO.sql.gz).
Supra-domain Phenotype Ontology and its Annotations
Although domain-centric annotations hold great promise in describing phenotypic nature of independent domains, most domains themselves may not just work alone. In multi-domain proteins, they may be combined together to form distinct domain architectures. The recombination of the existing domains is considered as one of major driving forces for phenotypic diversificaation. As an extension, we have also generated supra-domain phenotype ontology and its annotations. Compared to domain-centric phenotype ontology and annotations (SCOP domains at the Superfamily level and Family level), this version focuses on supra-domains and individual SCOP domains ONLY at the Superfamily level. Besides, in terms of individual superfamilies, their annotations from the domain-centric version may be different from those from supra-domains version. Depending on your focus, the former should be used for the consideration of both the Superfamily level and Family level, otherwise the latter should be used if you are interested in domain combinations. Also, we provide several relevant files for the download, including the annotation and the corresponding ontology for each phenotype ontology.
- Supra-domain Domain Disease Ontology (DO) Ontology (SPDO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DO.txt, and the corresponding ontology:SPDO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Human Phenotype (HP) Ontology (SPHO) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2HP.txt, and the corresponding ontology:SPHO.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Mouse Phenotype (MP) Ontology (SPMP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2MP.txt, and the corresponding ontology:SPMP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Worm Phenotype (WP) Ontology (SPWP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2WP.txt, and the corresponding ontology:SPWP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Yeast Phenotype (YP) Ontology (SPYP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2YP.txt, and the corresponding ontology:SPYP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Phenotype (FP) Ontology (SPFP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FP.txt, and the corresponding ontology:SPFP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Fly Anatomy (FA) Ontology (SPFA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2FA.txt, and the corresponding ontology:SPFA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Zebrafish Anatomy (ZA) Ontology (SPZA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2ZA.txt, and the corresponding ontology:SPZA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Xenopus Anatomy (XA) Ontology (SPXA) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2XA.txt, and the corresponding ontology:SPXA.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Arabidopsis Plant Ontology (AP) Ontology (SPAP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2AP.txt, and the corresponding ontology:SPAP.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain Enzyme Commission (EC) Ontology (SPEC) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2EC.txt, and the corresponding ontology:SPEC.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain DrugBank ATC (DB) Ontology (SPDB) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2DB.txt, and the corresponding ontology:SPDB.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB KeyWords (KW) Ontology (SPKW) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2KW.txt, and the corresponding ontology:SPKW.txt) and mysql tables (SP2PO.sql.gz).
- Supra-domain Domain UniProtKB UniPathway (UP) Ontology (SPUP) and its Annotations: For details, please visit Document: PO annotation for Supra-domains, wherein Data Availability contains parsable flat files (the annotation:SP2UP.txt, and the corresponding ontology:SPUP.txt) and mysql tables (SP2PO.sql.gz).
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Superfamily(show details)
Superfamily domains annotated to this WP term (SDWP level: Least Informative)
Highlighted in gray are those with FDR_all>0.001
SCOP term | FDR (all) | Annotation (direct or inherited) |
Helical domain of Sec23/24 | 0 | DIRECT |
P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
GroEL-intermediate domain like | 0 | DIRECT |
RBP11-like subunits of RNA polymerase | 0 | DIRECT |
GroEL equatorial domain-like | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
LEM domain | 0 | DIRECT |
Sec1/munc18-like (SM) proteins | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
Heme-dependent catalase-like | 0 | DIRECT |
14-3-3 protein | 0 | DIRECT |
Profilin (actin-binding protein) | 0 | DIRECT |
Integrin alpha N-terminal domain | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Subdomain of clathrin and coatomer appendage domain | 0 | DIRECT |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
ARM repeat | 0 | DIRECT |
GroEL apical domain-like | 0 | DIRECT |
Integrin domains | 0 | DIRECT |
Histone-fold | 0.0000000000005317 | DIRECT |
WD40 repeat-like | 0.00000000001444 | DIRECT |
PH domain-like | 0.000000004186 | DIRECT |
GTPase activation domain, GAP | 0.000000009049 | DIRECT |
Skp1 dimerisation domain-like | 0.0000000122 | DIRECT |
Calponin-homology domain, CH-domain | 0.00000003255 | DIRECT |
Tubulin C-terminal domain-like | 0.0000002103 | DIRECT |
Sm-like ribonucleoproteins | 0.0000007545 | DIRECT |
Tubulin nucleotide-binding domain-like | 0.0000008514 | DIRECT |
SNARE-like | 0.0000008533 | DIRECT |
t-snare proteins | 0.000001753 | DIRECT |
SH3-domain | 0.000002652 | DIRECT |
Fibronectin type III | 0.000003812 | DIRECT |
TPR-like | 0.000004634 | DIRECT |
C2 domain (Calcium/lipid-binding domain, CaLB) | 0.00001669 | DIRECT |
Tropomyosin | 0.00005946 | DIRECT |
Immunoglobulin | 0.0001393 | DIRECT |
Class II aaRS and biotin synthetases | 0.0002224 | DIRECT |
Prefoldin | 0.0002526 | DIRECT |
Troponin coil-coiled subunits | 0.0002526 | DIRECT |
Actin-like ATPase domain | 0.0002571 | DIRECT |
Ubiquitin-like | 0.0003729 | DIRECT |
RNA-binding domain, RBD | 0.0004276 | DIRECT |
SNARE fusion complex | 0.0004585 | DIRECT |
Intermediate filament protein, coiled coil region | 0.00067 | DIRECT |
Spectrin repeat | 0.00067 | DIRECT |
Lamin A/C globular tail domain | 0.00067 | DIRECT |
"Winged helix" DNA-binding domain | 0.0007448 | DIRECT |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 0.0007526 | DIRECT |
Trimeric LpxA-like enzymes | 0.0007843 | DIRECT |
Nucleic acid-binding proteins | 0.0008259 | DIRECT |
Ribosomal proteins S24e, L23 and L15e | 0.0009049 | DIRECT |
ValRS/IleRS/LeuRS editing domain | 0.0009049 | DIRECT |
Translation proteins SH3-like domain | 0.001292 | INHERITED FROM: germ cell morphology variant || oocyte number decreased || cell membrane organization biogenesis variant || cell type morphology variant || germ cell compartment expansion variant || cell component morphology variant |
Cysteine-rich domain | 0.002204 | INHERITED FROM: germ cell partition morphology variant || mitochondria alignment variant || cell type morphology variant || body wall muscle sarcomere morphology variant || axon morphology variant || striated muscle morphology variant |
Calpain large subunit, middle domain (domain III) | 0.003217 | INHERITED FROM: mitochondria morphology variant || cell type morphology variant || body wall muscle sarcomere morphology variant || muscle cell morphology variant || cell component morphology variant || striated muscle morphology variant |
Class II aaRS ABD-related | 0.003217 | INHERITED FROM: germ cell morphology variant || cell type morphology variant || cytoplasmic processing body variant || cell component morphology variant |
Riboflavin synthase domain-like | 0.003217 | INHERITED FROM: endosome morphology variant || lysosome-related organelle morphology variant || vesicle morphology variant || vesicle organization variant || recycling endosome morphology variant || cell component morphology variant |
Activating enzymes of the ubiquitin-like proteins | 0.003217 | INHERITED FROM: germ cell morphology variant || germ cell compartment nuclei number variant || cell component morphology variant |
Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.003217 | INHERITED FROM: endosome morphology variant || lysosome-related organelle morphology variant || vesicle morphology variant || vesicle organization variant || recycling endosome morphology variant || cell component morphology variant |
Annexin | 0.004124 | INHERITED FROM: germ cell morphology variant |
ADC-like | 0.004124 | INHERITED FROM: germ cell cytoplasmic morphology variant || germ cell morphology variant || cytoplasmic processing body variant || endoplasmic reticulum morphology variant || cell organization biogenesis variant |
Cdc48 domain 2-like | 0.004124 | INHERITED FROM: germ cell cytoplasmic morphology variant || germ cell morphology variant || cytoplasmic processing body variant || endoplasmic reticulum morphology variant || cell organization biogenesis variant |
beta-sandwich domain of Sec23/24 | 0.004124 | INHERITED FROM: nuclear positioning variant || germ cell compartment morphology variant || germ cell morphology variant || oocyte morphology variant || germ cell compartment expansion variant || germline nuclear positioning variant || organelle organization biogenesis variant || cell organization biogenesis variant || germ cell compartment size variant |
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.004174 | INHERITED FROM: germ cell compartment morphology variant || oocyte number decreased || oocyte morphology variant || germ cell compartment expansion variant || germline nuclear positioning variant || nuclei enlarged |
Growth factor receptor domain | 0.005774 | INHERITED FROM: body wall muscle sarcomere morphology variant || muscle cell morphology variant |
dsRNA-binding domain-like | 0.008419 | INHERITED FROM: germ cell morphology variant || cytoplasmic processing body variant |
PDZ domain-like | 0.009595 | INHERITED FROM: cell membrane morphology variant || synapse morphology variant || actin organization biogenesis variant || endomitotic oocytes || cell junction variant |
Metal cation-transporting ATPase, ATP-binding domain N | 0.009681 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
Zn-binding ribosomal proteins | 0.009762 | INHERITED FROM: germ cell morphology variant || cytoplasmic processing body variant |
DBL homology domain (DH-domain) | 0.01009 | INHERITED FROM: mitochondria alignment variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || striated muscle morphology variant |
Protein kinase-like (PK-like) | 0.01112 | INHERITED FROM: mitochondria alignment variant || myopodia present || mitochondrial content variant || muscle cell morphology variant |
HAD-like | 0.01223 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
Translation proteins | 0.01286 | INHERITED FROM: germ cell morphology variant || germ cell compartment expansion variant |
S15/NS1 RNA-binding domain | 0.01394 | INHERITED FROM: germ cell compartment morphology variant || germ cell morphology variant || oocyte morphology variant || germ cell compartment expansion variant |
Calcium ATPase, transmembrane domain M | 0.0141 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
EGF/Laminin | 0.01459 | INHERITED FROM: axon trajectory variant || body wall muscle sarcomere morphology variant || muscle cell morphology variant |
F1F0 ATP synthase subunit C | 0.01547 | INHERITED FROM: nuclear appearance variant || recycling endosome localization variant || germ cell compartment morphology variant || endosome morphology variant || germ cell morphology variant || lysosome-related organelle morphology variant || germ cell compartment nuclei number variant || oocyte morphology variant || cell membrane organization biogenesis variant || germ cell compartment anucleate || vesicle morphology variant || germ cell compartment expansion variant || vesicle organization variant || oocytes lack nucleus || cell component localization variant || recycling endosome morphology variant || endosome localization variant || cell organization biogenesis variant || RAB-11 recycling endosome localization variant |
CAD & PB1 domains | 0.01547 | INHERITED FROM: cell organization biogenesis variant |
PLC-like phosphodiesterases | 0.01595 | INHERITED FROM: germ cell morphology variant || oocyte morphology variant || endomitotic oocytes |
Calcium ATPase, transduction domain A | 0.02204 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
PYP-like sensor domain (PAS domain) | 0.02305 | INHERITED FROM: neurite morphology variant |
CCCH zinc finger | 0.02396 | INHERITED FROM: germ cell cytoplasmic morphology variant || P granule abnormal |
SH2 domain | 0.03399 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || cell component localization variant || muscle cell morphology variant || striated muscle morphology variant |
Translational machinery components | 0.036 | INHERITED FROM: germ cell compartment morphology variant || oocyte number decreased || oocyte morphology variant || germ cell compartment expansion variant |
Nucleotidylyl transferase | 0.03962 | INHERITED FROM: nuclei enlarged |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.04097 | INHERITED FROM: germ cell compartment morphology variant || oocyte number decreased || germ cell compartment expansion variant |
Myosin rod fragments | 0.04097 | INHERITED FROM: body wall muscle sarcomere morphology variant || muscle cell morphology variant || body wall muscle thick filament variant || striated muscle morphology variant |
L30e-like | 0.04097 | INHERITED FROM: germ cell compartment morphology variant || nuclei small || oocyte number decreased || oocyte morphology variant || germ cell compartment expansion variant |
EF-hand | 0.04786 | INHERITED FROM: annulae morphology variant || endomitotic oocytes |
Cyclin-like | 0.06389 | INHERITED FROM: embryonic cell organization biogenesis variant || pronucleus centrosomes defective early emb || pronuclear size defective early emb || pronuclear morphology defective early emb || nuclear appearance number defective early emb || multiple cytoplasmic cavities early emb || embryonic cell morphology variant || excess pronucleus early emb || multiple nuclei early emb || cytoplasmic appearance variant || nuclear morphology variation early emb || nucleus defective early emb || excess maternal pronucleus early emb |
ACP-like | 0.06613 | INHERITED FROM: oocyte number decreased || oocyte morphology variant |
Second domain of FERM | 0.07336 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || cell component localization variant || striated muscle morphology variant |
Ribosomal protein S5 domain 2-like | 0.08104 | INHERITED FROM: nuclear appearance variant || germ cell compartment expansion variant |
Glutathione synthetase ATP-binding domain-like | 0.1041 | INHERITED FROM: body wall muscle myosin organization defective || body wall muscle thick filament variant |
SAM/Pointed domain | 0.1946 | INHERITED FROM: synapse morphology variant |
Concanavalin A-like lectins/glucanases | 0.2397 | INHERITED FROM: neurite morphology variant || commissure handedness defective || axon morphology variant |
SMAD/FHA domain | 0.2574 | INHERITED FROM: axon branching variant |
Cystine-knot cytokines | 0.4137 | INHERITED FROM: synapse morphology variant |
(Phosphotyrosine protein) phosphatases II | 0.6944 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant |
POZ domain | 0.846 | INHERITED FROM: embryonic cell organization biogenesis variant || cytoskeleton organization biogenesis variant || cytoplasmic appearance defective early emb || spindle position orientation defective early emb || cytoplasmic dynamics defective early emb || spindle defective early emb || spindle position variant || spindle position defective early emb || cytoplasmic appearance variant || spindle variant || excessive blebbing early emb || microtubule organization biogenesis variant || mitotic spindle defective early emb |
Voltage-gated potassium channels | 1 | INHERITED FROM: mitochondria morphology variant || body wall muscle sarcomere morphology variant || muscle cell morphology variant || striated muscle morphology variant |
L domain-like | 1 | INHERITED FROM: myopodia present |
NAD(P)-binding Rossmann-fold domains | 1 | INHERITED FROM: fat associated bodies variant |
SCOP term | FDR (all) | Annotation (direct or inherited) |
Helical domain of Sec23/24 | 0 | Direct |
P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
GroEL-intermediate domain like | 0 | Direct |
RBP11-like subunits of RNA polymerase | 0 | Direct |
GroEL equatorial domain-like | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
LEM domain | 0 | Direct |
Sec1/munc18-like (SM) proteins | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
Heme-dependent catalase-like | 0 | Direct |
14-3-3 protein | 0 | Direct |
Profilin (actin-binding protein) | 0 | Direct |
Integrin alpha N-terminal domain | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Subdomain of clathrin and coatomer appendage domain | 0 | Direct |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
ARM repeat | 0 | Direct |
GroEL apical domain-like | 0 | Direct |
Integrin domains | 0 | Direct |
Histone-fold | 0.0000000000005317 | Direct |
WD40 repeat-like | 0.00000000001444 | Direct |
PH domain-like | 0.000000004186 | Direct |
GTPase activation domain, GAP | 0.000000009049 | Direct |
Skp1 dimerisation domain-like | 0.0000000122 | Direct |
Calponin-homology domain, CH-domain | 0.00000003255 | Direct |
Tubulin C-terminal domain-like | 0.0000002103 | Direct |
Sm-like ribonucleoproteins | 0.0000007545 | Direct |
Tubulin nucleotide-binding domain-like | 0.0000008514 | Direct |
SNARE-like | 0.0000008533 | Direct |
t-snare proteins | 0.000001753 | Direct |
SH3-domain | 0.000002652 | Direct |
Fibronectin type III | 0.000003812 | Direct |
TPR-like | 0.000004634 | Direct |
C2 domain (Calcium/lipid-binding domain, CaLB) | 0.00001669 | Direct |
Tropomyosin | 0.00005946 | Direct |
Immunoglobulin | 0.0001393 | Direct |
Class II aaRS and biotin synthetases | 0.0002224 | Direct |
Prefoldin | 0.0002526 | Direct |
Troponin coil-coiled subunits | 0.0002526 | Direct |
Actin-like ATPase domain | 0.0002571 | Direct |
Ubiquitin-like | 0.0003729 | Direct |
RNA-binding domain, RBD | 0.0004276 | Direct |
SNARE fusion complex | 0.0004585 | Direct |
Intermediate filament protein, coiled coil region | 0.00067 | Direct |
Spectrin repeat | 0.00067 | Direct |
Lamin A/C globular tail domain | 0.00067 | Direct |
"Winged helix" DNA-binding domain | 0.0007448 | Direct |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 0.0007526 | Direct |
Trimeric LpxA-like enzymes | 0.0007843 | Direct |
Nucleic acid-binding proteins | 0.0008259 | Direct |
Ribosomal proteins S24e, L23 and L15e | 0.0009049 | Direct |
ValRS/IleRS/LeuRS editing domain | 0.0009049 | Direct |
Translation proteins SH3-like domain | 0.001292 | Inherited |
Cysteine-rich domain | 0.002204 | Inherited |
Calpain large subunit, middle domain (domain III) | 0.003217 | Inherited |
Class II aaRS ABD-related | 0.003217 | Inherited |
Riboflavin synthase domain-like | 0.003217 | Inherited |
Activating enzymes of the ubiquitin-like proteins | 0.003217 | Inherited |
Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.003217 | Inherited |
Annexin | 0.004124 | Inherited |
ADC-like | 0.004124 | Inherited |
Cdc48 domain 2-like | 0.004124 | Inherited |
beta-sandwich domain of Sec23/24 | 0.004124 | Inherited |
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.004174 | Inherited |
Growth factor receptor domain | 0.005774 | Inherited |
dsRNA-binding domain-like | 0.008419 | Inherited |
PDZ domain-like | 0.009595 | Inherited |
Metal cation-transporting ATPase, ATP-binding domain N | 0.009681 | Inherited |
Zn-binding ribosomal proteins | 0.009762 | Inherited |
DBL homology domain (DH-domain) | 0.01009 | Inherited |
Protein kinase-like (PK-like) | 0.01112 | Inherited |
HAD-like | 0.01223 | Inherited |
Translation proteins | 0.01286 | Inherited |
S15/NS1 RNA-binding domain | 0.01394 | Inherited |
Calcium ATPase, transmembrane domain M | 0.0141 | Inherited |
EGF/Laminin | 0.01459 | Inherited |
F1F0 ATP synthase subunit C | 0.01547 | Inherited |
CAD & PB1 domains | 0.01547 | Inherited |
PLC-like phosphodiesterases | 0.01595 | Inherited |
Calcium ATPase, transduction domain A | 0.02204 | Inherited |
PYP-like sensor domain (PAS domain) | 0.02305 | Inherited |
CCCH zinc finger | 0.02396 | Inherited |
SH2 domain | 0.03399 | Inherited |
Translational machinery components | 0.036 | Inherited |
Nucleotidylyl transferase | 0.03962 | Inherited |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.04097 | Inherited |
Myosin rod fragments | 0.04097 | Inherited |
L30e-like | 0.04097 | Inherited |
EF-hand | 0.04786 | Inherited |
Cyclin-like | 0.06389 | Inherited |
ACP-like | 0.06613 | Inherited |
Second domain of FERM | 0.07336 | Inherited |
Ribosomal protein S5 domain 2-like | 0.08104 | Inherited |
Glutathione synthetase ATP-binding domain-like | 0.1041 | Inherited |
SAM/Pointed domain | 0.1946 | Inherited |
Concanavalin A-like lectins/glucanases | 0.2397 | Inherited |
SMAD/FHA domain | 0.2574 | Inherited |
Cystine-knot cytokines | 0.4137 | Inherited |
(Phosphotyrosine protein) phosphatases II | 0.6944 | Inherited |
POZ domain | 0.846 | Inherited |
Voltage-gated potassium channels | 1 | Inherited |
L domain-like | 1 | Inherited |
NAD(P)-binding Rossmann-fold domains | 1 | Inherited |
Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Family(show details)
Family domains annotated to this WP term (Not in SDWP)
Highlighted in gray are those with FDR_all>0.001
SCOP term | FDR (all) | Annotation (direct or inherited) |
POU-specific domain | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
beta-sandwich domain of Sec23/24 | 0 | DIRECT |
Inositol polyphosphate 5-phosphatase (IPP5) | 0 | DIRECT |
Heme-dependent catalases | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
Sec1/munc18-like (SM) proteins | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
14-3-3 protein | 0 | DIRECT |
Phoshoinositide 3-kinase (PI3K) helical domain | 0 | DIRECT |
Mammalian PLC | 0 | DIRECT |
LEM domain | 0 | DIRECT |
Trunk domain of Sec23/24 | 0 | DIRECT |
Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
Integrin domains | 0 | DIRECT |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
Profilin (actin-binding protein) | 0 | DIRECT |
Anticodon-binding domain of Class II aaRS | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
Nucleosome core histones | 0.000000000001841 | DIRECT |
Motor proteins | 0.00000000223 | DIRECT |
Skp1 dimerisation domain-like | 0.00000003109 | DIRECT |
WD40-repeat | 0.0000002233 | DIRECT |
Calponin-homology domain, CH-domain | 0.0000004764 | DIRECT |
Tubulin, C-terminal domain | 0.000001367 | DIRECT |
I set domains | 0.000001427 | DIRECT |
BCR-homology GTPase activation domain (BH-domain) | 0.00000265 | DIRECT |
Proteasome subunits | 0.000003087 | DIRECT |
Pleckstrin-homology domain (PH domain) | 0.000004281 | DIRECT |
Tubulin, GTPase domain | 0.000004692 | DIRECT |
t-snare proteins | 0.000005655 | DIRECT |
Sm motif of small nuclear ribonucleoproteins, SNRNP | 0.00001478 | DIRECT |
G proteins | 0.00001877 | DIRECT |
Actin/HSP70 | 0.00002224 | DIRECT |
Pumilio repeat | 0.00004266 | DIRECT |
LIM domain | 0.00004266 | DIRECT |
Fibronectin type III | 0.00005246 | DIRECT |
SH3-domain | 0.0000605 | DIRECT |
Clathrin adaptor core protein | 0.00009537 | DIRECT |
Clathrin coat assembly domain | 0.00009537 | DIRECT |
PDZ domain | 0.0001649 | DIRECT |
Tropomyosin | 0.0001776 | DIRECT |
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain | 0.0002204 | DIRECT |
DNA replication initiator (cdc21/cdc54) N-terminal domain | 0.0003856 | DIRECT |
Laminin-type module | 0.0003856 | DIRECT |
RecA protein-like (ATPase-domain) | 0.0003856 | DIRECT |
Armadillo repeat | 0.0005388 | DIRECT |
Spectrin repeat | 0.0005939 | DIRECT |
BAR domain | 0.001544 | INHERITED FROM: cell component morphology variant |
Ubiquitin activating enzymes (UBA) | 0.001544 | INHERITED FROM: cell component morphology variant |
ValRS/IleRS/LeuRS editing domain | 0.001544 | INHERITED FROM: cell component morphology variant |
Smc hinge domain | 0.001544 | INHERITED FROM: cell component morphology variant |
EF-hand modules in multidomain proteins | 0.001544 | INHERITED FROM: cell type morphology variant || striated muscle morphology variant |
Intermediate filament protein, coiled coil region | 0.001651 | INHERITED FROM: excretory cell morphology variant || excretory canal morphology variant || cell component morphology variant |
PLC-like (P variant) | 0.001651 | INHERITED FROM: oocyte morphology variant || cell type morphology variant || body wall muscle sarcomere morphology variant || endomitotic oocytes || striated muscle morphology variant |
Prefoldin | 0.002014 | INHERITED FROM: embryonic cell organization biogenesis variant || pronucleus centrosomes defective early emb || cytoskeleton organization biogenesis variant || spindle variant || microtubule organization biogenesis variant || cell organization biogenesis variant || mitotic spindle defective early emb || cell component morphology variant || pronuclear migration defective early emb |
SNARE fusion complex | 0.003934 | INHERITED FROM: lysosome morphology variant |
Canonical RBD | 0.004229 | INHERITED FROM: oocytes disorganized || P granule localization defective |
Extended AAA-ATPase domain | 0.004851 | INHERITED FROM: embryonic cell organization biogenesis variant || cell cell contacts abnormal || cell cell contacts abnormal in four cell embryo || germ cell compartment anucleate || nucleus reforms cell division remnant early emb || multiple cytoplasmic cavities early emb || embryonic cell morphology variant || meiotic spindle defective early emb || germ cell compartment small || cytoplasmic appearance variant || endoplasmic reticulum morphology variant || excessive blebbing early emb || microtubule organization biogenesis variant || cell component morphology variant |
Calpain large subunit, middle domain (domain III) | 0.006077 | INHERITED FROM: mitochondria morphology variant || body wall muscle sarcomere morphology variant || muscle cell morphology variant || striated muscle morphology variant |
Cdc48 domain 2-like | 0.006115 | INHERITED FROM: germ cell cytoplasmic morphology variant || germ cell morphology variant || cytoplasmic processing body variant || endoplasmic reticulum morphology variant || cell organization biogenesis variant |
Annexin | 0.006115 | INHERITED FROM: germ cell morphology variant |
Anticodon-binding domain | 0.006115 | INHERITED FROM: germ cell compartment morphology variant || germ cell morphology variant || oocyte number decreased || oocyte morphology variant || germ cell compartment expansion variant || cell organization biogenesis variant |
Ferredoxin reductase FAD-binding domain-like | 0.006115 | INHERITED FROM: endosome morphology variant || lysosome-related organelle morphology variant || vesicle morphology variant || vesicle organization variant || recycling endosome morphology variant |
Troponin I | 0.006115 | INHERITED FROM: muscle cell morphology variant |
Cdc48 N-terminal domain-like | 0.006115 | INHERITED FROM: germ cell cytoplasmic morphology variant || germ cell morphology variant || cytoplasmic processing body variant || endoplasmic reticulum morphology variant || cell organization biogenesis variant |
First domain of FERM | 0.006905 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || striated muscle morphology variant |
Lamin A/C globular tail domain | 0.0139 | INHERITED FROM: excretory cell morphology variant || body wall muscle sarcomere morphology variant || excretory canal morphology variant |
Growth factor receptor domain | 0.02215 | INHERITED FROM: myopodia present |
Transforming growth factor (TGF)-beta | 0.02291 | INHERITED FROM: synapse morphology variant |
L30e/L7ae ribosomal proteins | 0.02291 | INHERITED FROM: germ cell compartment morphology variant || oocyte number decreased || oocyte morphology variant || germ cell compartment expansion variant |
DEP domain | 0.02291 | INHERITED FROM: embryonic cell organization biogenesis variant || cytoskeleton organization biogenesis variant || spindle defective early emb || organelle organization biogenesis variant || spindle variant || microtubule organization biogenesis variant || cell organization biogenesis variant || mitotic spindle defective early emb |
F1F0 ATP synthase subunit C | 0.02291 | INHERITED FROM: nuclear appearance variant || recycling endosome localization variant || germ cell compartment morphology variant || endosome morphology variant || lysosome-related organelle morphology variant || germ cell compartment nuclei number variant || oocyte morphology variant || cell membrane organization biogenesis variant || germ cell compartment anucleate || vesicle morphology variant || germ cell compartment expansion variant || vesicle organization variant || oocytes lack nucleus || cell component localization variant || recycling endosome morphology variant || endosome localization variant || cell organization biogenesis variant || RAB-11 recycling endosome localization variant |
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.02356 | INHERITED FROM: oocyte number decreased || germ cell compartment expansion variant |
DBL homology domain (DH-domain) | 0.02403 | INHERITED FROM: mitochondria alignment variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || striated muscle morphology variant |
Third domain of FERM | 0.02674 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || cell component localization variant || striated muscle morphology variant |
Synaptotagmin-like (S variant) | 0.03425 | INHERITED FROM: body wall muscle sarcomere morphology variant |
Translational machinery components | 0.03762 | INHERITED FROM: nuclear appearance variant || germ cell compartment morphology variant || germ cell morphology variant || oocytes small || oocyte morphology variant || germ cell compartment expansion variant |
Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03762 | INHERITED FROM: germ cell morphology variant |
Nitrogenase iron protein-like | 0.04538 | INHERITED FROM: oocyte number decreased |
Laminin G-like module | 0.04538 | INHERITED FROM: neurite morphology variant || myopodia present || neuron morphology variant || commissure handedness defective || axon morphology variant |
Calcium ATPase, transduction domain A | 0.0497 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
Protein kinases, catalytic subunit | 0.05692 | INHERITED FROM: mitochondria alignment variant || myopodia present || mitochondrial content variant || muscle cell morphology variant |
CCCH zinc finger | 0.06087 | INHERITED FROM: germ cell cytoplasmic morphology variant || P granule abnormal |
Cyclin | 0.06108 | INHERITED FROM: nuclear appearance variant || embryonic cell organization biogenesis variant || pronucleus centrosomes defective early emb || pronuclear size defective early emb || pronuclear morphology defective early emb || nuclear appearance number defective early emb || multiple cytoplasmic cavities early emb || embryonic cell morphology variant || excess pronucleus early emb || multiple nuclei early emb || cytoplasmic appearance variant || nuclear morphology variation early emb || nucleus defective early emb || excess maternal pronucleus early emb |
Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0.06108 | INHERITED FROM: oocyte number decreased || nuclei enlarged |
Myosin rod fragments | 0.06528 | INHERITED FROM: body wall muscle sarcomere morphology variant || muscle cell morphology variant || body wall muscle thick filament variant || striated muscle morphology variant |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.06528 | INHERITED FROM: oocyte number decreased || germ cell compartment expansion variant |
BTB/POZ domain | 0.08866 | INHERITED FROM: embryonic cell organization biogenesis variant || cytoskeleton organization biogenesis variant || cytoplasmic appearance defective early emb || spindle position orientation defective early emb || cytoplasmic dynamics defective early emb || spindle defective early emb || spindle position variant || spindle position defective early emb || organelle organization biogenesis variant || cytoplasmic appearance variant || spindle variant || excessive blebbing early emb || microtubule organization biogenesis variant || cell organization biogenesis variant || mitotic spindle defective early emb |
DNA polymerase I | 0.09477 | INHERITED FROM: embryonic cell organization biogenesis variant |
Second domain of FERM | 0.09804 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || cell component localization variant || striated muscle morphology variant |
Cold shock DNA-binding domain-like | 0.1131 | INHERITED FROM: nuclear appearance variant || germ cell cytoplasmic morphology variant || germ cell morphology variant || oocyte number decreased || germ cell compartment expansion variant || cytoplasmic processing body variant |
SH2 domain | 0.1268 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || cell component localization variant || muscle cell morphology variant || striated muscle morphology variant |
Calpain large subunit, catalytic domain (domain II) | 0.1383 | INHERITED FROM: mitochondria morphology variant || body wall muscle sarcomere morphology variant || muscle cell morphology variant || striated muscle morphology variant |
Elongation factors | 0.167 | INHERITED FROM: nuclear appearance variant || germ cell compartment morphology variant || oocytes small || oocyte morphology variant || germ cell compartment expansion variant |
DnaQ-like 3'-5' exonuclease | 0.2284 | INHERITED FROM: embryonic cell organization biogenesis variant |
FHA domain | 0.2513 | INHERITED FROM: neurite morphology variant || axon branching variant || axon morphology variant |
Ubiquitin-related | 0.3323 | INHERITED FROM: nuclei small |
Calmodulin-like | 0.6609 | INHERITED FROM: annulae morphology variant |
Voltage-gated potassium channels | 1 | INHERITED FROM: mitochondria morphology variant |
SCOP term | FDR (all) | Annotation (direct or inherited) |
POU-specific domain | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
beta-sandwich domain of Sec23/24 | 0 | Direct |
Inositol polyphosphate 5-phosphatase (IPP5) | 0 | Direct |
Heme-dependent catalases | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
Sec1/munc18-like (SM) proteins | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
14-3-3 protein | 0 | Direct |
Phoshoinositide 3-kinase (PI3K) helical domain | 0 | Direct |
Mammalian PLC | 0 | Direct |
LEM domain | 0 | Direct |
Trunk domain of Sec23/24 | 0 | Direct |
Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
Integrin domains | 0 | Direct |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
Profilin (actin-binding protein) | 0 | Direct |
Anticodon-binding domain of Class II aaRS | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
Nucleosome core histones | 0.000000000001841 | Direct |
Motor proteins | 0.00000000223 | Direct |
Skp1 dimerisation domain-like | 0.00000003109 | Direct |
WD40-repeat | 0.0000002233 | Direct |
Calponin-homology domain, CH-domain | 0.0000004764 | Direct |
Tubulin, C-terminal domain | 0.000001367 | Direct |
I set domains | 0.000001427 | Direct |
BCR-homology GTPase activation domain (BH-domain) | 0.00000265 | Direct |
Proteasome subunits | 0.000003087 | Direct |
Pleckstrin-homology domain (PH domain) | 0.000004281 | Direct |
Tubulin, GTPase domain | 0.000004692 | Direct |
t-snare proteins | 0.000005655 | Direct |
Sm motif of small nuclear ribonucleoproteins, SNRNP | 0.00001478 | Direct |
G proteins | 0.00001877 | Direct |
Actin/HSP70 | 0.00002224 | Direct |
Pumilio repeat | 0.00004266 | Direct |
LIM domain | 0.00004266 | Direct |
Fibronectin type III | 0.00005246 | Direct |
SH3-domain | 0.0000605 | Direct |
Clathrin adaptor core protein | 0.00009537 | Direct |
Clathrin coat assembly domain | 0.00009537 | Direct |
PDZ domain | 0.0001649 | Direct |
Tropomyosin | 0.0001776 | Direct |
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain | 0.0002204 | Direct |
DNA replication initiator (cdc21/cdc54) N-terminal domain | 0.0003856 | Direct |
Laminin-type module | 0.0003856 | Direct |
RecA protein-like (ATPase-domain) | 0.0003856 | Direct |
Armadillo repeat | 0.0005388 | Direct |
Spectrin repeat | 0.0005939 | Direct |
BAR domain | 0.001544 | Inherited |
Ubiquitin activating enzymes (UBA) | 0.001544 | Inherited |
ValRS/IleRS/LeuRS editing domain | 0.001544 | Inherited |
Smc hinge domain | 0.001544 | Inherited |
EF-hand modules in multidomain proteins | 0.001544 | Inherited |
Intermediate filament protein, coiled coil region | 0.001651 | Inherited |
PLC-like (P variant) | 0.001651 | Inherited |
Prefoldin | 0.002014 | Inherited |
SNARE fusion complex | 0.003934 | Inherited |
Canonical RBD | 0.004229 | Inherited |
Extended AAA-ATPase domain | 0.004851 | Inherited |
Calpain large subunit, middle domain (domain III) | 0.006077 | Inherited |
Cdc48 domain 2-like | 0.006115 | Inherited |
Annexin | 0.006115 | Inherited |
Anticodon-binding domain | 0.006115 | Inherited |
Ferredoxin reductase FAD-binding domain-like | 0.006115 | Inherited |
Troponin I | 0.006115 | Inherited |
Cdc48 N-terminal domain-like | 0.006115 | Inherited |
First domain of FERM | 0.006905 | Inherited |
Lamin A/C globular tail domain | 0.0139 | Inherited |
Growth factor receptor domain | 0.02215 | Inherited |
Transforming growth factor (TGF)-beta | 0.02291 | Inherited |
L30e/L7ae ribosomal proteins | 0.02291 | Inherited |
DEP domain | 0.02291 | Inherited |
F1F0 ATP synthase subunit C | 0.02291 | Inherited |
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.02356 | Inherited |
DBL homology domain (DH-domain) | 0.02403 | Inherited |
Third domain of FERM | 0.02674 | Inherited |
Synaptotagmin-like (S variant) | 0.03425 | Inherited |
Translational machinery components | 0.03762 | Inherited |
Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03762 | Inherited |
Nitrogenase iron protein-like | 0.04538 | Inherited |
Laminin G-like module | 0.04538 | Inherited |
Calcium ATPase, transduction domain A | 0.0497 | Inherited |
Protein kinases, catalytic subunit | 0.05692 | Inherited |
CCCH zinc finger | 0.06087 | Inherited |
Cyclin | 0.06108 | Inherited |
Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0.06108 | Inherited |
Myosin rod fragments | 0.06528 | Inherited |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.06528 | Inherited |
BTB/POZ domain | 0.08866 | Inherited |
DNA polymerase I | 0.09477 | Inherited |
Second domain of FERM | 0.09804 | Inherited |
Cold shock DNA-binding domain-like | 0.1131 | Inherited |
SH2 domain | 0.1268 | Inherited |
Calpain large subunit, catalytic domain (domain II) | 0.1383 | Inherited |
Elongation factors | 0.167 | Inherited |
DnaQ-like 3'-5' exonuclease | 0.2284 | Inherited |
FHA domain | 0.2513 | Inherited |
Ubiquitin-related | 0.3323 | Inherited |
Calmodulin-like | 0.6609 | Inherited |
Voltage-gated potassium channels | 1 | Inherited |
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]
Supra-domain (including individual superfamily)
(show details)
Supra-domains annotated to this WP term (SPWP level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
GroEL equatorial domain-like | 0 | DIRECT |
Heme-dependent catalase-like | 0 | DIRECT |
P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
14-3-3 protein | 0 | DIRECT |
Integrin domains | 0 | DIRECT |
LEM domain | 0 | DIRECT |
Profilin (actin-binding protein) | 0 | DIRECT |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
Integrin alpha N-terminal domain | 0 | DIRECT |
RBP11-like subunits of RNA polymerase | 0 | DIRECT |
GroEL apical domain-like | 0 | DIRECT |
GroEL-intermediate domain like | 0 | DIRECT |
Subdomain of clathrin and coatomer appendage domain | 0 | DIRECT |
Helical domain of Sec23/24 | 0 | DIRECT |
Sec1/munc18-like (SM) proteins | 0 | DIRECT |
C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
ARM repeat | 0 | DIRECT |
Zn-finger domain of Sec23/24 | 0 | DIRECT |
Histone-fold | 0.0000000000004185 | DIRECT |
WD40 repeat-like | 0.0000000000114 | DIRECT |
PH domain-like | 0.000000003334 | DIRECT |
GTPase activation domain, GAP | 0.000000007214 | DIRECT |
Skp1 dimerisation domain-like | 0.000000009734 | DIRECT |
Calponin-homology domain, CH-domain | 0.00000002602 | DIRECT |
Tubulin C-terminal domain-like | 0.000000169 | DIRECT |
Sm-like ribonucleoproteins | 0.0000006089 | DIRECT |
Tubulin nucleotide-binding domain-like | 0.0000006875 | DIRECT |
SNARE-like | 0.0000006891 | DIRECT |
t-snare proteins | 0.00000142 | DIRECT |
SH3-domain | 0.00000215 | DIRECT |
Fibronectin type III | 0.000003096 | DIRECT |
TPR-like | 0.000003766 | DIRECT |
C2 domain (Calcium/lipid-binding domain, CaLB) | 0.0000136 | DIRECT |
Tropomyosin | 0.00004866 | DIRECT |
Immunoglobulin | 0.0001143 | DIRECT |
Class II aaRS and biotin synthetases | 0.0001828 | DIRECT |
Troponin coil-coiled subunits | 0.0002077 | DIRECT |
Prefoldin | 0.0002077 | DIRECT |
Actin-like ATPase domain | 0.0002116 | DIRECT |
Ubiquitin-like | 0.0003075 | DIRECT |
RNA-binding domain, RBD | 0.0003532 | DIRECT |
SNARE fusion complex | 0.0003789 | DIRECT |
Lamin A/C globular tail domain | 0.0005556 | DIRECT |
Intermediate filament protein, coiled coil region | 0.0005556 | DIRECT |
Spectrin repeat | 0.0005556 | DIRECT |
"Winged helix" DNA-binding domain | 0.0006187 | DIRECT |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 0.0006253 | DIRECT |
Trimeric LpxA-like enzymes | 0.0006521 | DIRECT |
Nucleic acid-binding proteins | 0.0006868 | DIRECT |
ValRS/IleRS/LeuRS editing domain | 0.0007529 | DIRECT |
Ribosomal proteins S24e, L23 and L15e | 0.0007529 | DIRECT |
Translation proteins SH3-like domain | 0.001077 | INHERITED FROM: cell membrane organization biogenesis variant || cell component morphology variant || germ cell morphology variant || germ cell compartment expansion variant || oocyte number decreased || cell type morphology variant |
Cysteine-rich domain | 0.001851 | INHERITED FROM: striated muscle morphology variant || mitochondria alignment variant || axon morphology variant || body wall muscle sarcomere morphology variant || germ cell partition morphology variant || cell type morphology variant |
Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.002718 | INHERITED FROM: cell component morphology variant || endosome morphology variant || recycling endosome morphology variant || lysosome-related organelle morphology variant || vesicle morphology variant || vesicle organization variant |
Class II aaRS ABD-related | 0.002718 | INHERITED FROM: cytoplasmic processing body variant || cell component morphology variant || germ cell morphology variant || cell type morphology variant |
Activating enzymes of the ubiquitin-like proteins | 0.002718 | INHERITED FROM: cell component morphology variant || germ cell compartment nuclei number variant || germ cell morphology variant |
Calpain large subunit, middle domain (domain III) | 0.002718 | INHERITED FROM: cell component morphology variant || striated muscle morphology variant || muscle cell morphology variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant || cell type morphology variant |
Riboflavin synthase domain-like | 0.002718 | INHERITED FROM: cell component morphology variant || endosome morphology variant || recycling endosome morphology variant || lysosome-related organelle morphology variant || vesicle morphology variant || vesicle organization variant |
Actin depolymerizing proteins | 0.003486 | INHERITED FROM: cell type morphology variant |
Cdc48 domain 2-like | 0.003493 | INHERITED FROM: cytoplasmic processing body variant || germ cell cytoplasmic morphology variant || endoplasmic reticulum morphology variant || germ cell morphology variant || cell organization biogenesis variant |
Annexin | 0.003493 | INHERITED FROM: germ cell morphology variant |
beta-sandwich domain of Sec23/24 | 0.003493 | INHERITED FROM: oocyte morphology variant || germ cell morphology variant || germline nuclear positioning variant || germ cell compartment expansion variant || cell organization biogenesis variant || germ cell compartment size variant || nuclear positioning variant || germ cell compartment morphology variant || organelle organization biogenesis variant |
ADC-like | 0.003493 | INHERITED FROM: cytoplasmic processing body variant || germ cell cytoplasmic morphology variant || endoplasmic reticulum morphology variant || germ cell morphology variant || cell organization biogenesis variant |
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.003537 | INHERITED FROM: oocyte morphology variant || germline nuclear positioning variant || germ cell compartment expansion variant || oocyte number decreased || germ cell compartment morphology variant || nuclei enlarged |
Growth factor receptor domain | 0.004915 | INHERITED FROM: muscle cell morphology variant || body wall muscle sarcomere morphology variant |
dsRNA-binding domain-like | 0.007213 | INHERITED FROM: cytoplasmic processing body variant || germ cell morphology variant |
PDZ domain-like | 0.008245 | INHERITED FROM: synapse morphology variant || cell membrane morphology variant || actin organization biogenesis variant || cell junction variant || endomitotic oocytes |
Metal cation-transporting ATPase, ATP-binding domain N | 0.008319 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant || cell type morphology variant |
Zn-binding ribosomal proteins | 0.008392 | INHERITED FROM: cytoplasmic processing body variant || germ cell morphology variant |
DBL homology domain (DH-domain) | 0.008675 | INHERITED FROM: striated muscle morphology variant || mitochondria alignment variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
Protein kinase-like (PK-like) | 0.009581 | INHERITED FROM: myopodia present || mitochondrial content variant || mitochondria alignment variant || muscle cell morphology variant || mitochondria spacing variant |
HAD-like | 0.01055 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
Translation proteins | 0.0111 | INHERITED FROM: germ cell morphology variant || germ cell compartment expansion variant |
S15/NS1 RNA-binding domain | 0.01206 | INHERITED FROM: oocyte morphology variant || germ cell morphology variant || germ cell compartment expansion variant || germ cell compartment morphology variant |
Calcium ATPase, transmembrane domain M | 0.0122 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
EGF/Laminin | 0.01263 | INHERITED FROM: muscle cell morphology variant || axon trajectory variant || body wall muscle sarcomere morphology variant |
F1F0 ATP synthase subunit C | 0.0134 | INHERITED FROM: cell membrane organization biogenesis variant || recycling endosome localization variant || oocytes lack nucleus || RAB-11 recycling endosome localization variant || oocyte morphology variant || nuclear appearance variant || germ cell compartment nuclei number variant || endosome morphology variant || recycling endosome morphology variant || cell component localization variant || germ cell morphology variant || germ cell compartment expansion variant || lysosome-related organelle morphology variant || cell organization biogenesis variant || vesicle morphology variant || vesicle organization variant || endosome localization variant || germ cell compartment anucleate || germ cell compartment morphology variant |
CAD & PB1 domains | 0.0134 | INHERITED FROM: cell organization biogenesis variant |
PLC-like phosphodiesterases | 0.01384 | INHERITED FROM: oocyte morphology variant || germ cell morphology variant || endomitotic oocytes |
Calcium ATPase, transduction domain A | 0.01921 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
PYP-like sensor domain (PAS domain) | 0.02012 | INHERITED FROM: neurite morphology variant |
CCCH zinc finger | 0.02093 | INHERITED FROM: germ cell cytoplasmic morphology variant || P granule abnormal |
SH2 domain | 0.0299 | INHERITED FROM: striated muscle morphology variant || cell component localization variant || mitochondria alignment variant || muscle cell morphology variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
Translational machinery components | 0.0317 | INHERITED FROM: oocyte morphology variant || germ cell compartment expansion variant || oocyte number decreased || germ cell compartment morphology variant |
Nucleotidylyl transferase | 0.03493 | INHERITED FROM: nuclei enlarged |
L30e-like | 0.03613 | INHERITED FROM: oocyte morphology variant || germ cell morphology variant || germ cell compartment expansion variant || oocyte number decreased || nuclei small || germ cell compartment morphology variant |
Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03613 | INHERITED FROM: germ cell morphology variant |
Myosin rod fragments | 0.03613 | INHERITED FROM: striated muscle morphology variant || muscle cell morphology variant || body wall muscle sarcomere morphology variant || body wall muscle thick filament variant |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.03613 | INHERITED FROM: germ cell compartment expansion variant || oocyte number decreased || germ cell compartment morphology variant |
EF-hand | 0.04237 | INHERITED FROM: annulae morphology variant || endomitotic oocytes |
Cyclin-like | 0.05695 | INHERITED FROM: cytoplasmic appearance variant || nuclear appearance number defective early emb || pronucleus centrosomes defective early emb || excess maternal pronucleus early emb || multiple nuclei early emb || embryonic cell organization biogenesis variant || excess pronucleus early emb || multiple cytoplasmic cavities early emb || pronuclear size defective early emb || nucleus defective early emb || pronuclear morphology defective early emb || embryonic cell morphology variant || nuclear morphology variation early emb |
ACP-like | 0.05902 | INHERITED FROM: oocyte morphology variant || oocyte number decreased |
Second domain of FERM | 0.06564 | INHERITED FROM: striated muscle morphology variant || cell component localization variant || mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
Ribosomal protein S5 domain 2-like | 0.07274 | INHERITED FROM: nuclear appearance variant || germ cell compartment expansion variant |
Glutathione synthetase ATP-binding domain-like | 0.09413 | INHERITED FROM: body wall muscle myosin organization defective || body wall muscle thick filament variant |
SAM/Pointed domain | 0.1791 | INHERITED FROM: synapse morphology variant |
Concanavalin A-like lectins/glucanases | 0.2222 | INHERITED FROM: neurite morphology variant || commissure handedness defective || axon morphology variant |
SMAD/FHA domain | 0.2394 | INHERITED FROM: axon branching variant |
Cystine-knot cytokines | 0.393 | INHERITED FROM: synapse morphology variant |
(Phosphotyrosine protein) phosphatases II | 0.6736 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant |
POZ domain | 0.8289 | INHERITED FROM: cytoplasmic appearance defective early emb || spindle defective early emb || spindle position defective early emb || cytoplasmic appearance variant || cytoskeleton organization biogenesis variant || excessive blebbing early emb || spindle position variant || spindle position orientation defective early emb || spindle variant || embryonic cell organization biogenesis variant || microtubule organization biogenesis variant || cytoplasmic dynamics defective early emb || mitotic spindle defective early emb |
L domain-like | 1 | INHERITED FROM: myopodia present |
Voltage-gated potassium channels | 1 | INHERITED FROM: striated muscle morphology variant || muscle cell morphology variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
NAD(P)-binding Rossmann-fold domains | 1 | INHERITED FROM: fat associated bodies variant |
Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
GroEL equatorial domain-like | 0 | Direct |
Heme-dependent catalase-like | 0 | Direct |
P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
14-3-3 protein | 0 | Direct |
Integrin domains | 0 | Direct |
LEM domain | 0 | Direct |
Profilin (actin-binding protein) | 0 | Direct |
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
Integrin alpha N-terminal domain | 0 | Direct |
RBP11-like subunits of RNA polymerase | 0 | Direct |
GroEL apical domain-like | 0 | Direct |
GroEL-intermediate domain like | 0 | Direct |
Subdomain of clathrin and coatomer appendage domain | 0 | Direct |
Helical domain of Sec23/24 | 0 | Direct |
Sec1/munc18-like (SM) proteins | 0 | Direct |
C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
ARM repeat | 0 | Direct |
Zn-finger domain of Sec23/24 | 0 | Direct |
Histone-fold | 0.0000000000004185 | Direct |
WD40 repeat-like | 0.0000000000114 | Direct |
PH domain-like | 0.000000003334 | Direct |
GTPase activation domain, GAP | 0.000000007214 | Direct |
Skp1 dimerisation domain-like | 0.000000009734 | Direct |
Calponin-homology domain, CH-domain | 0.00000002602 | Direct |
Tubulin C-terminal domain-like | 0.000000169 | Direct |
Sm-like ribonucleoproteins | 0.0000006089 | Direct |
Tubulin nucleotide-binding domain-like | 0.0000006875 | Direct |
SNARE-like | 0.0000006891 | Direct |
t-snare proteins | 0.00000142 | Direct |
SH3-domain | 0.00000215 | Direct |
Fibronectin type III | 0.000003096 | Direct |
TPR-like | 0.000003766 | Direct |
C2 domain (Calcium/lipid-binding domain, CaLB) | 0.0000136 | Direct |
Tropomyosin | 0.00004866 | Direct |
Immunoglobulin | 0.0001143 | Direct |
Class II aaRS and biotin synthetases | 0.0001828 | Direct |
Troponin coil-coiled subunits | 0.0002077 | Direct |
Prefoldin | 0.0002077 | Direct |
Actin-like ATPase domain | 0.0002116 | Direct |
Ubiquitin-like | 0.0003075 | Direct |
RNA-binding domain, RBD | 0.0003532 | Direct |
SNARE fusion complex | 0.0003789 | Direct |
Lamin A/C globular tail domain | 0.0005556 | Direct |
Intermediate filament protein, coiled coil region | 0.0005556 | Direct |
Spectrin repeat | 0.0005556 | Direct |
"Winged helix" DNA-binding domain | 0.0006187 | Direct |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 0.0006253 | Direct |
Trimeric LpxA-like enzymes | 0.0006521 | Direct |
Nucleic acid-binding proteins | 0.0006868 | Direct |
ValRS/IleRS/LeuRS editing domain | 0.0007529 | Direct |
Ribosomal proteins S24e, L23 and L15e | 0.0007529 | Direct |
Translation proteins SH3-like domain | 0.001077 | Inherited |
Cysteine-rich domain | 0.001851 | Inherited |
Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.002718 | Inherited |
Class II aaRS ABD-related | 0.002718 | Inherited |
Activating enzymes of the ubiquitin-like proteins | 0.002718 | Inherited |
Calpain large subunit, middle domain (domain III) | 0.002718 | Inherited |
Riboflavin synthase domain-like | 0.002718 | Inherited |
Actin depolymerizing proteins | 0.003486 | Inherited |
Cdc48 domain 2-like | 0.003493 | Inherited |
Annexin | 0.003493 | Inherited |
beta-sandwich domain of Sec23/24 | 0.003493 | Inherited |
ADC-like | 0.003493 | Inherited |
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.003537 | Inherited |
Growth factor receptor domain | 0.004915 | Inherited |
dsRNA-binding domain-like | 0.007213 | Inherited |
PDZ domain-like | 0.008245 | Inherited |
Metal cation-transporting ATPase, ATP-binding domain N | 0.008319 | Inherited |
Zn-binding ribosomal proteins | 0.008392 | Inherited |
DBL homology domain (DH-domain) | 0.008675 | Inherited |
Protein kinase-like (PK-like) | 0.009581 | Inherited |
HAD-like | 0.01055 | Inherited |
Translation proteins | 0.0111 | Inherited |
S15/NS1 RNA-binding domain | 0.01206 | Inherited |
Calcium ATPase, transmembrane domain M | 0.0122 | Inherited |
EGF/Laminin | 0.01263 | Inherited |
F1F0 ATP synthase subunit C | 0.0134 | Inherited |
CAD & PB1 domains | 0.0134 | Inherited |
PLC-like phosphodiesterases | 0.01384 | Inherited |
Calcium ATPase, transduction domain A | 0.01921 | Inherited |
PYP-like sensor domain (PAS domain) | 0.02012 | Inherited |
CCCH zinc finger | 0.02093 | Inherited |
SH2 domain | 0.0299 | Inherited |
Translational machinery components | 0.0317 | Inherited |
Nucleotidylyl transferase | 0.03493 | Inherited |
L30e-like | 0.03613 | Inherited |
Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03613 | Inherited |
Myosin rod fragments | 0.03613 | Inherited |
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.03613 | Inherited |
EF-hand | 0.04237 | Inherited |
Cyclin-like | 0.05695 | Inherited |
ACP-like | 0.05902 | Inherited |
Second domain of FERM | 0.06564 | Inherited |
Ribosomal protein S5 domain 2-like | 0.07274 | Inherited |
Glutathione synthetase ATP-binding domain-like | 0.09413 | Inherited |
SAM/Pointed domain | 0.1791 | Inherited |
Concanavalin A-like lectins/glucanases | 0.2222 | Inherited |
SMAD/FHA domain | 0.2394 | Inherited |
Cystine-knot cytokines | 0.393 | Inherited |
(Phosphotyrosine protein) phosphatases II | 0.6736 | Inherited |
POZ domain | 0.8289 | Inherited |
L domain-like | 1 | Inherited |
Voltage-gated potassium channels | 1 | Inherited |
NAD(P)-binding Rossmann-fold domains | 1 | Inherited |
(show details)
Supra-domains annotated to this WP term (SPWP level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
47473,51695 47473 - EF-hand 51695 - PLC-like phosphodiesterases | 0 | DIRECT |
48592,54849 48592 - GroEL equatorial domain-like 54849 - GroEL-intermediate domain like | 0 | DIRECT |
81383,50978 81383 - F-box domain 50978 - WD40 repeat-like | 0 | DIRECT |
81811,82754 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
49265,48726 49265 - Fibronectin type III 48726 - Immunoglobulin | 0 | DIRECT |
50729,47473 50729 - PH domain-like 47473 - EF-hand | 0 | DIRECT |
54849,52029 54849 - GroEL-intermediate domain like 52029 - GroEL apical domain-like | 0 | DIRECT |
52540,47917 52540 - P-loop containing nucleoside triphosphate hydrolases 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
49562,48371 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat | 0 | DIRECT |
54585,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | DIRECT |
51695,49562 51695 - PLC-like phosphodiesterases 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
50692,54585 50692 - ADC-like 54585 - Cdc48 domain 2-like | 0 | DIRECT |
82919,53300 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | DIRECT |
64356,49447 64356 - SNARE-like 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
49348,55711 49348 - Clathrin adaptor appendage domain 55711 - Subdomain of clathrin and coatomer appendage domain | 0 | DIRECT |
54695,81382 54695 - POZ domain 81382 - Skp1 dimerisation domain-like | 0.000000009759 | DIRECT |
57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0.0000001558 | DIRECT |
52490,55307 52490 - Tubulin nucleotide-binding domain-like 55307 - Tubulin C-terminal domain-like | 0.0000006875 | DIRECT |
48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.000004429 | DIRECT |
48371,48371 48371 - ARM repeat 48371 - ARM repeat | 0.000008766 | DIRECT |
53067,53067 53067 - Actin-like ATPase domain 53067 - Actin-like ATPase domain | 0.0000171 | DIRECT |
46966,46966 46966 - Spectrin repeat 46966 - Spectrin repeat | 0.00003333 | DIRECT |
48726,49265 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.000185 | DIRECT |
48452,48452 48452 - TPR-like 48452 - TPR-like | 0.0002916 | DIRECT |
57196,57196 57196 - EGF/Laminin 57196 - EGF/Laminin | 0.0003367 | DIRECT |
50677,52374 50677 - ValRS/IleRS/LeuRS editing domain 52374 - Nucleotidylyl transferase | 0.0007529 | DIRECT |
64593,74853 64593 - Intermediate filament protein, coiled coil region 74853 - Lamin A/C globular tail domain | 0.0008659 | DIRECT |
54001,49758 54001 - Cysteine proteinases 49758 - Calpain large subunit, middle domain (domain III) | 0.0008659 | DIRECT |
50044,55550 50044 - SH3-domain 55550 - SH2 domain | 0.0008659 | DIRECT |
49265,49265 49265 - Fibronectin type III 49265 - Fibronectin type III | 0.002718 | INHERITED FROM: cell component morphology variant || striated muscle morphology variant || axon morphology variant || body wall muscle sarcomere morphology variant |
50978,50978 50978 - WD40 repeat-like 50978 - WD40 repeat-like | 0.002736 | INHERITED FROM: cell component morphology variant || cilia morphology variant || ciliated neuron morphology variant |
63380,52343 63380 - Riboflavin synthase domain-like 52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.003486 | INHERITED FROM: endosome morphology variant || recycling endosome morphology variant || lysosome-related organelle morphology variant || vesicle morphology variant || vesicle organization variant |
81333,81333 81333 - F1F0 ATP synthase subunit C 81333 - F1F0 ATP synthase subunit C | 0.003493 | INHERITED FROM: cell membrane organization biogenesis variant || recycling endosome localization variant || oocytes lack nucleus || RAB-11 recycling endosome localization variant || oocyte morphology variant || nuclear appearance variant || germ cell compartment nuclei number variant || endosome morphology variant || recycling endosome morphology variant || cell component localization variant || germ cell morphology variant || germ cell compartment expansion variant || lysosome-related organelle morphology variant || cell organization biogenesis variant || vesicle morphology variant || vesicle organization variant || endosome localization variant || germ cell compartment anucleate || germ cell compartment morphology variant |
55681,52954 55681 - Class II aaRS and biotin synthetases 52954 - Class II aaRS ABD-related | 0.003493 | INHERITED FROM: germ cell morphology variant |
55550,50044 55550 - SH2 domain 50044 - SH3-domain | 0.003493 | INHERITED FROM: striated muscle morphology variant || cell component localization variant || mitochondria alignment variant || muscle cell morphology variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
47954,47954 47954 - Cyclin-like 47954 - Cyclin-like | 0.005058 | INHERITED FROM: cytoplasmic appearance variant || nuclear appearance number defective early emb || nuclear appearance variant || pronucleus centrosomes defective early emb || excess maternal pronucleus early emb || multiple nuclei early emb || embryonic cell organization biogenesis variant || excess pronucleus early emb || multiple cytoplasmic cavities early emb || pronuclear size defective early emb || nuclear number defective early emb || nucleus defective early emb || pronuclear morphology defective early emb || embryonic cell morphology variant || nuclear morphology variation early emb |
81660,56784 81660 - Metal cation-transporting ATPase, ATP-binding domain N 56784 - HAD-like | 0.008319 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant || cell type morphology variant |
50044,50044 50044 - SH3-domain 50044 - SH3-domain | 0.00955 | INHERITED FROM: striated muscle morphology variant || mitochondria alignment variant || mitochondria spacing variant || body wall muscle sarcomere morphology variant |
50249,55681 50249 - Nucleic acid-binding proteins 55681 - Class II aaRS and biotin synthetases | 0.0134 | INHERITED FROM: oocyte morphology variant || germ cell morphology variant || germ cell compartment expansion variant || cell organization biogenesis variant || oocyte number decreased || germ cell compartment morphology variant |
48065,50729 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like | 0.01384 | INHERITED FROM: striated muscle morphology variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
47031,50729 47031 - Second domain of FERM 50729 - PH domain-like | 0.01384 | INHERITED FROM: striated muscle morphology variant || cell component localization variant || mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
100920,100934 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.02012 | INHERITED FROM: germ cell morphology variant |
53098,56672 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases | 0.0317 | INHERITED FROM: embryonic cell organization biogenesis variant || cell organization biogenesis variant |
57625,57625 57625 - Invertebrate chitin-binding proteins 57625 - Invertebrate chitin-binding proteins | 0.0317 | INHERITED FROM: cell organization biogenesis variant |
50447,50465 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.03613 | INHERITED FROM: germ cell compartment expansion variant || oocyte number decreased || germ cell compartment morphology variant |
53067,100920 53067 - Actin-like ATPase domain 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03613 | INHERITED FROM: germ cell morphology variant |
54236,47031 54236 - Ubiquitin-like 47031 - Second domain of FERM | 0.05339 | INHERITED FROM: striated muscle morphology variant || cell component localization variant || mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
52374,47323 52374 - Nucleotidylyl transferase 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.05364 | INHERITED FROM: oocyte morphology variant || nuclear appearance variant || germ cell compartment expansion variant || oocyte number decreased || germ cell compartment morphology variant || nuclei enlarged |
90257,90257 90257 - Myosin rod fragments 90257 - Myosin rod fragments | 0.05902 | INHERITED FROM: striated muscle morphology variant || muscle cell morphology variant || body wall muscle sarcomere morphology variant || body wall muscle thick filament variant |
52540,50447 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins | 0.06564 | INHERITED FROM: oocyte morphology variant || nuclear appearance variant || oocytes small || germ cell compartment expansion variant || germ cell compartment morphology variant |
90229,90229 90229 - CCCH zinc finger 90229 - CCCH zinc finger | 0.1665 | INHERITED FROM: germ cell cytoplasmic morphology variant || P granule abnormal |
54928,54928 54928 - RNA-binding domain, RBD 54928 - RNA-binding domain, RBD | 0.1704 | INHERITED FROM: oocytes disorganized |
52540,52540 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.3017 | INHERITED FROM: endoplasmic reticulum morphology variant || meiotic spindle defective early emb |
55550,56112 55550 - SH2 domain 56112 - Protein kinase-like (PK-like) | 0.5226 | INHERITED FROM: mitochondria alignment variant || mitochondria spacing variant |
Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
47473,51695 47473 - EF-hand 51695 - PLC-like phosphodiesterases | 0 | Direct |
48592,54849 48592 - GroEL equatorial domain-like 54849 - GroEL-intermediate domain like | 0 | Direct |
81383,50978 81383 - F-box domain 50978 - WD40 repeat-like | 0 | Direct |
81811,82754 81811 - Helical domain of Sec23/24 82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
49265,48726 49265 - Fibronectin type III 48726 - Immunoglobulin | 0 | Direct |
50729,47473 50729 - PH domain-like 47473 - EF-hand | 0 | Direct |
54849,52029 54849 - GroEL-intermediate domain like 52029 - GroEL apical domain-like | 0 | Direct |
52540,47917 52540 - P-loop containing nucleoside triphosphate hydrolases 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
49562,48371 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat | 0 | Direct |
54585,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | Direct |
51695,49562 51695 - PLC-like phosphodiesterases 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
50692,54585 50692 - ADC-like 54585 - Cdc48 domain 2-like | 0 | Direct |
82919,53300 82919 - Zn-finger domain of Sec23/24 53300 - vWA-like | 0 | Direct |
64356,49447 64356 - SNARE-like 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
49348,55711 49348 - Clathrin adaptor appendage domain 55711 - Subdomain of clathrin and coatomer appendage domain | 0 | Direct |
54695,81382 54695 - POZ domain 81382 - Skp1 dimerisation domain-like | 0.000000009759 | Direct |
57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0.0000001558 | Direct |
52490,55307 52490 - Tubulin nucleotide-binding domain-like 55307 - Tubulin C-terminal domain-like | 0.0000006875 | Direct |
48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.000004429 | Direct |
48371,48371 48371 - ARM repeat 48371 - ARM repeat | 0.000008766 | Direct |
53067,53067 53067 - Actin-like ATPase domain 53067 - Actin-like ATPase domain | 0.0000171 | Direct |
46966,46966 46966 - Spectrin repeat 46966 - Spectrin repeat | 0.00003333 | Direct |
48726,49265 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.000185 | Direct |
48452,48452 48452 - TPR-like 48452 - TPR-like | 0.0002916 | Direct |
57196,57196 57196 - EGF/Laminin 57196 - EGF/Laminin | 0.0003367 | Direct |
50677,52374 50677 - ValRS/IleRS/LeuRS editing domain 52374 - Nucleotidylyl transferase | 0.0007529 | Direct |
64593,74853 64593 - Intermediate filament protein, coiled coil region 74853 - Lamin A/C globular tail domain | 0.0008659 | Direct |
54001,49758 54001 - Cysteine proteinases 49758 - Calpain large subunit, middle domain (domain III) | 0.0008659 | Direct |
50044,55550 50044 - SH3-domain 55550 - SH2 domain | 0.0008659 | Direct |
49265,49265 49265 - Fibronectin type III 49265 - Fibronectin type III | 0.002718 | Inherited |
50978,50978 50978 - WD40 repeat-like 50978 - WD40 repeat-like | 0.002736 | Inherited |
63380,52343 63380 - Riboflavin synthase domain-like 52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.003486 | Inherited |
81333,81333 81333 - F1F0 ATP synthase subunit C 81333 - F1F0 ATP synthase subunit C | 0.003493 | Inherited |
55681,52954 55681 - Class II aaRS and biotin synthetases 52954 - Class II aaRS ABD-related | 0.003493 | Inherited |
55550,50044 55550 - SH2 domain 50044 - SH3-domain | 0.003493 | Inherited |
47954,47954 47954 - Cyclin-like 47954 - Cyclin-like | 0.005058 | Inherited |
81660,56784 81660 - Metal cation-transporting ATPase, ATP-binding domain N 56784 - HAD-like | 0.008319 | Inherited |
50044,50044 50044 - SH3-domain 50044 - SH3-domain | 0.00955 | Inherited |
50249,55681 50249 - Nucleic acid-binding proteins 55681 - Class II aaRS and biotin synthetases | 0.0134 | Inherited |
48065,50729 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like | 0.01384 | Inherited |
47031,50729 47031 - Second domain of FERM 50729 - PH domain-like | 0.01384 | Inherited |
100920,100934 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.02012 | Inherited |
53098,56672 53098 - Ribonuclease H-like 56672 - DNA/RNA polymerases | 0.0317 | Inherited |
57625,57625 57625 - Invertebrate chitin-binding proteins 57625 - Invertebrate chitin-binding proteins | 0.0317 | Inherited |
50447,50465 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.03613 | Inherited |
53067,100920 53067 - Actin-like ATPase domain 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03613 | Inherited |
54236,47031 54236 - Ubiquitin-like 47031 - Second domain of FERM | 0.05339 | Inherited |
52374,47323 52374 - Nucleotidylyl transferase 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.05364 | Inherited |
90257,90257 90257 - Myosin rod fragments 90257 - Myosin rod fragments | 0.05902 | Inherited |
52540,50447 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins | 0.06564 | Inherited |
90229,90229 90229 - CCCH zinc finger 90229 - CCCH zinc finger | 0.1665 | Inherited |
54928,54928 54928 - RNA-binding domain, RBD 54928 - RNA-binding domain, RBD | 0.1704 | Inherited |
52540,52540 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.3017 | Inherited |
55550,56112 55550 - SH2 domain 56112 - Protein kinase-like (PK-like) | 0.5226 | Inherited |
(show details)
Supra-domains annotated to this WP term (SPWP level: Least Informative)
Highlighted in gray are those with FDR>0.001
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
49562,48371,56112 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
46966,46966,46966 46966 - Spectrin repeat 46966 - Spectrin repeat 46966 - Spectrin repeat | 0 | DIRECT |
50729,47473,51695 50729 - PH domain-like 47473 - EF-hand 51695 - PLC-like phosphodiesterases | 0 | DIRECT |
50692,54585,52540 50692 - ADC-like 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54585,52540,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48592,54849,52029 48592 - GroEL equatorial domain-like 54849 - GroEL-intermediate domain like 52029 - GroEL apical domain-like | 0 | DIRECT |
48726,49265,48726 48726 - Immunoglobulin 49265 - Fibronectin type III 48726 - Immunoglobulin | 0 | DIRECT |
48726,48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.0000007321 | DIRECT |
57716,57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0.00000142 | DIRECT |
48726,48726,49265 48726 - Immunoglobulin 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.0001918 | DIRECT |
57196,57196,57196 57196 - EGF/Laminin 57196 - EGF/Laminin 57196 - EGF/Laminin | 0.008666 | INHERITED FROM: myopodia present |
57625,57625,57625 57625 - Invertebrate chitin-binding proteins 57625 - Invertebrate chitin-binding proteins 57625 - Invertebrate chitin-binding proteins | 0.0134 | INHERITED FROM: cell organization biogenesis variant |
81660,56784,81665 81660 - Metal cation-transporting ATPase, ATP-binding domain N 56784 - HAD-like 81665 - Calcium ATPase, transmembrane domain M | 0.01921 | INHERITED FROM: seam cell morphology variant || epithelial cell morphology variant |
53067,100920,100934 53067 - Actin-like ATPase domain 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.02012 | INHERITED FROM: germ cell morphology variant |
54236,47031,50729 54236 - Ubiquitin-like 47031 - Second domain of FERM 50729 - PH domain-like | 0.03578 | INHERITED FROM: striated muscle morphology variant || cell component localization variant || mitochondria alignment variant || mitochondria spacing variant || mitochondria morphology variant || body wall muscle sarcomere morphology variant |
53067,53067,100920 53067 - Actin-like ATPase domain 53067 - Actin-like ATPase domain 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03613 | INHERITED FROM: germ cell morphology variant |
52540,50447,50465 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.03613 | INHERITED FROM: germ cell compartment expansion variant || oocyte number decreased || germ cell compartment morphology variant |
Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
49562,48371,56112 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat 56112 - Protein kinase-like (PK-like) | 0 | Direct |
46966,46966,46966 46966 - Spectrin repeat 46966 - Spectrin repeat 46966 - Spectrin repeat | 0 | Direct |
50729,47473,51695 50729 - PH domain-like 47473 - EF-hand 51695 - PLC-like phosphodiesterases | 0 | Direct |
50692,54585,52540 50692 - ADC-like 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54585,52540,52540 54585 - Cdc48 domain 2-like 52540 - P-loop containing nucleoside triphosphate hydrolases 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48592,54849,52029 48592 - GroEL equatorial domain-like 54849 - GroEL-intermediate domain like 52029 - GroEL apical domain-like | 0 | Direct |
48726,49265,48726 48726 - Immunoglobulin 49265 - Fibronectin type III 48726 - Immunoglobulin | 0 | Direct |
48726,48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.0000007321 | Direct |
57716,57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0.00000142 | Direct |
48726,48726,49265 48726 - Immunoglobulin 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.0001918 | Direct |
57196,57196,57196 57196 - EGF/Laminin 57196 - EGF/Laminin 57196 - EGF/Laminin | 0.008666 | Inherited |
57625,57625,57625 57625 - Invertebrate chitin-binding proteins 57625 - Invertebrate chitin-binding proteins 57625 - Invertebrate chitin-binding proteins | 0.0134 | Inherited |
81660,56784,81665 81660 - Metal cation-transporting ATPase, ATP-binding domain N 56784 - HAD-like 81665 - Calcium ATPase, transmembrane domain M | 0.01921 | Inherited |
53067,100920,100934 53067 - Actin-like ATPase domain 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.02012 | Inherited |
54236,47031,50729 54236 - Ubiquitin-like 47031 - Second domain of FERM 50729 - PH domain-like | 0.03578 | Inherited |
53067,53067,100920 53067 - Actin-like ATPase domain 53067 - Actin-like ATPase domain 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0.03613 | Inherited |
52540,50447,50465 52540 - P-loop containing nucleoside triphosphate hydrolases 50447 - Translation proteins 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 0.03613 | Inherited |
Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
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