SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Worm Phenotype (WP): copulation variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + 2:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ 1:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
0:   copulation variant [WBPhenotype:0000647] <2>(13|8) (15|3|0)
- 1:   male mating variant [WBPhenotype:0000648] <7>(13|8) (15|3|0)
- 1:   hermaphrodite mating variant [WBPhenotype:0004001] <3>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.000000000003271Direct
C-type lectin-like0.000000009351Direct
Glutathione synthetase ATP-binding domain-like0.000002901Direct
Troponin coil-coiled subunits0.00006469Direct
PLC-like phosphodiesterases0.000462Direct
NTF2-like0.001086Inherited
BPTI-like0.004695Inherited
Tubulin nucleotide-binding domain-like0.006179Inherited
Tubulin C-terminal domain-like0.009432Inherited
cAMP-binding domain-like0.011Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.08227Inherited
Voltage-gated potassium channels0.09386Inherited
ARM repeat0.3626Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000000000005593Direct
G proteins0.000002028Direct
C-type lectin domain0.0001825Direct
Mammalian PLC0.001703Inherited
Tubulin, GTPase domain0.003309Inherited
Tubulin, C-terminal domain0.005143Inherited
cAMP-binding domain0.006417Inherited
Motor proteins0.01464Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.00000000000258Direct
C-type lectin-like0.000000007455Direct
Glutathione synthetase ATP-binding domain-like0.000002353Direct
Troponin coil-coiled subunits0.00005291Direct
PLC-like phosphodiesterases0.0003819Direct
NTF2-like0.0009047Direct
BPTI-like0.003985Inherited
Tubulin nucleotide-binding domain-like0.005264Inherited
Tubulin C-terminal domain-like0.008101Inherited
cAMP-binding domain-like0.009475Inherited
Growth factor receptor domain0.02221Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.07387Inherited
Voltage-gated potassium channels0.0846Inherited
PH domain-like0.3084Inherited
ARM repeat0.3423Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000000000258Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.005264Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.07136Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)