SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Worm Phenotype (WP): body wall muscle thick filament variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + + + + + 6:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + + 5:   cell type morphology variant [WBPhenotype:0002108] <12>(77|76) (79|45|15)
+ + + + + 5:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ + + + 4:   muscle cell morphology variant [WBPhenotype:0000904] <4>(23|27) (23|16|6)
+ + + + 4:   muscle system morphology variant [WBPhenotype:0000603] <2>(21|23) (21|16|5)
+ + + 3:   striated muscle morphology variant [WBPhenotype:0000924] <2>(20|23) (20|16|5)
+ + 2:   body wall muscle morphology variant [WBPhenotype:0000926] <3>(19|21) (19|15|4)
+ 1:   body wall muscle sarcomere morphology variant [WBPhenotype:0001889] <4>(19|21) (19|15|4)
0:   body wall muscle thick filament variant [WBPhenotype:0000782] <1>(5|3) (5|2|1)
- 1:   body wall muscle myosin organization defective [WBPhenotype:0001569](4|2) (4|1|1)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Myosin rod fragments0.00000007375Direct
Glutathione synthetase ATP-binding domain-like0.0002807Direct
Actin-like ATPase domain0.006586Inherited
Integrin domains0.01962Inherited
Calponin-homology domain, CH-domain0.1813Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Myosin rod fragments0.00000007316Direct
Actin/HSP700.003092Inherited
Calponin-homology domain, CH-domain0.1104Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Myosin rod fragments0.00000005907Direct
Glutathione synthetase ATP-binding domain-like0.0002311Direct
Actin-like ATPase domain0.005617Inherited
Integrin domains0.01706Inherited
Calponin-homology domain, CH-domain0.1666Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.00000144Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.005617Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.205Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)