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Worm Phenotype (WP): striated muscle morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + 2:   cell type morphology variant [WBPhenotype:0002108] <12>(77|76) (79|45|15)
+ + 2:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ 1:   muscle cell morphology variant [WBPhenotype:0000904] <4>(23|27) (23|16|6)
+ 1:   muscle system morphology variant [WBPhenotype:0000603] <2>(21|23) (21|16|5)
0:   striated muscle morphology variant [WBPhenotype:0000924] <2>(20|23) (20|16|5)
- 1:   body wall muscle morphology variant [WBPhenotype:0000926] <3>(19|21) (19|15|4)
- 1:   male longitudinal muscle morphology variant [WBPhenotype:0000927](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
SH3-domain0.00000000002704Direct
Calponin-homology domain, CH-domain0.00000001911Direct
SH2 domain0.00000006089Direct
Spectrin repeat0.0000001344Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0000001418Direct
Calpain large subunit, middle domain (domain III)0.0000003132Direct
Myosin rod fragments0.00003096Direct
Second domain of FERM0.00008955Direct
Tropomyosin0.0001025Direct
DBL homology domain (DH-domain)0.000128Direct
Voltage-gated potassium channels0.0004781Direct
Cysteine-rich domain0.0006515Direct
Actin-like ATPase domain0.006835Inherited
Glutathione synthetase ATP-binding domain-like0.021Inherited
Growth factor receptor domain0.9703Inherited
Immunoglobulin1Inherited
Troponin coil-coiled subunits1Inherited
Fibronectin type III1Inherited
EGF/Laminin1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
SH3-domain0.0000000003666Direct
Pleckstrin-homology domain (PH domain)0.0000000008115Direct
Calponin-homology domain, CH-domain0.00000008763Direct
Spectrin repeat0.0000001271Direct
LIM domain0.0000001271Direct
SH2 domain0.0000004553Direct
Calpain large subunit, middle domain (domain III)0.0000006569Direct
Calpain large subunit, catalytic domain (domain II)0.00005081Direct
EF-hand modules in multidomain proteins0.00005254Direct
Myosin rod fragments0.00005433Direct
Third domain of FERM0.0001028Direct
Second domain of FERM0.0001221Direct
First domain of FERM0.0001474Direct
PLC-like (P variant)0.0001779Direct
Tropomyosin0.0001779Direct
DBL homology domain (DH-domain)0.0002552Direct
Lamin A/C globular tail domain0.00103Inherited
Synaptotagmin-like (S variant)0.001284Inherited
Actin/HSP700.001362Inherited
Laminin-type module1Inherited
Fibronectin type III1Inherited
I set domains1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Integrin domains0Direct
SH3-domain0.00000000002136Direct
Calponin-homology domain, CH-domain0.00000001525Direct
SH2 domain0.00000004873Direct
Spectrin repeat0.0000001078Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0000001137Direct
Calpain large subunit, middle domain (domain III)0.0000002519Direct
Myosin rod fragments0.00002528Direct
Second domain of FERM0.00007335Direct
Tropomyosin0.00008397Direct
DBL homology domain (DH-domain)0.000105Direct
Voltage-gated potassium channels0.0003955Direct
Cysteine-rich domain0.0005401Direct
Actin-like ATPase domain0.005831Inherited
Glutathione synthetase ATP-binding domain-like0.01829Inherited
Growth factor receptor domain0.9581Inherited
Troponin coil-coiled subunits1Inherited
Immunoglobulin1Inherited
Fibronectin type III1Inherited
EGF/Laminin1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000001484Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00000006613Direct
    54001,49758
  • 54001 - Cysteine proteinases
  • 49758 - Calpain large subunit, middle domain (domain III)
  • 0.00000006613Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.000006133Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00001217Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.0001781Direct
    64593,74853
  • 64593 - Intermediate filament protein, coiled coil region
  • 74853 - Lamin A/C globular tail domain
  • 0.0001781Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0001781Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.0001781Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.0002121Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.0002121Direct
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.0003369Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.002809Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.9821Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 1Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0000000001308Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000000009911Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0001373Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.9332Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 1Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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