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Worm Phenotype (WP): neuron migration variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + 2:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
+ 1:   cell migration variant [WBPhenotype:0000594] <6>(24|23) (24|5|1)
0:   neuron migration variant [WBPhenotype:0001140] <3>(15|14) (15|3|0)
- 1:   posterior neuron migration variant [WBPhenotype:0001520] <2>(2|2) (2|0|0)
- 1:   anterior neuron migration defective [WBPhenotype:0001229] <1>(3|2) (3|0|0)
- 1:   Q neuroblast lineage migration variant [WBPhenotype:0000469](12|12) (12|3|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
UBC-like0Direct
WWE domain0Direct
RING/U-box0Direct
Frizzled cysteine-rich domain0Direct
Skp1 dimerisation domain-like0Direct
B-box zinc-binding domain0.000000000000008505Direct
Hect, E3 ligase catalytic domain0.0000000000000277Direct
Cysteine proteinases0.0000008075Direct
UBA-like0.0001023Direct
POZ domain0.000156Direct
PX domain0.0006214Direct
RCC1/BLIP-II0.0006214Direct
NHL repeat0.08608Inherited
BAR/IMD domain-like0.08608Inherited
Immunoglobulin0.6322Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
UBC-related0Direct
WWE domain0Direct
RING finger domain, C3HC40Direct
Frizzled cysteine-rich domain0Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0Direct
Skp1 dimerisation domain-like0Direct
B-box zinc-binding domain0.00000000000001281Direct
Hect, E3 ligase catalytic domain0.00000000000003493Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0.00000169Direct
Myotubularin-like phosphatases0.000008026Direct
BTB/POZ domain0.00000848Direct
PX domain0.0005994Direct
NHL repeat0.06059Inherited
I set domains0.1189Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RING/U-box0Direct
Skp1 dimerisation domain-like0Direct
UBC-like0Direct
Frizzled cysteine-rich domain0Direct
WWE domain0Direct
B-box zinc-binding domain0.000000000000006667Direct
Hect, E3 ligase catalytic domain0.00000000000002173Direct
Cysteine proteinases0.0000006518Direct
UBA-like0.0000838Direct
POZ domain0.000128Direct
PX domain0.0005149Direct
RCC1/BLIP-II0.0005149Direct
BAR/IMD domain-like0.07738Inherited
NHL repeat0.07738Inherited
Immunoglobulin0.6103Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    57850,117839
  • 57850 - RING/U-box
  • 117839 - WWE domain
  • 0Direct
    57850,57845
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0.0000000000005263Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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