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Worm Phenotype (WP): larval physiology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ 1:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
0:   larval physiology variant [WBPhenotype:0001293] <1>(13|15) (13|5|0)
- 1:   dauer larva physiology variant [WBPhenotype:0002527] <4>(13|15) (13|4|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Heme-dependent catalase-like0Direct
14-3-3 protein0Direct
Insulin-like0Direct
Histone-fold0.0000001704Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0005997Direct
SMAD MH1 domain0.001081Inherited
Protein kinase-like (PK-like)0.001097Inherited
TPR-like0.008297Inherited
CoA-dependent acyltransferases0.008834Inherited
SMAD/FHA domain0.009928Inherited
PapD-like0.06983Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.07547Inherited
Nuclear receptor ligand-binding domain0.2722Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Heme-dependent catalases0Direct
Insulin-like0Direct
14-3-3 protein0Direct
Nucleosome core histones0.00000001227Direct
SMAD domain0.0002883Direct
SMAD MH1 domain0.001021Inherited
NagD-like0.001451Inherited
PLC-like (P variant)0.001814Inherited
Protein kinases, catalytic subunit0.005138Inherited
Choline/Carnitine O-acyltransferase0.009891Inherited
Pleckstrin-homology domain (PH domain)0.01046Inherited
MSP-like0.05654Inherited
Nuclear receptor ligand-binding domain0.228Inherited
Nuclear receptor0.2523Inherited
WD40-repeat0.3682Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Heme-dependent catalase-like0Direct
14-3-3 protein0Direct
Insulin-like0Direct
Histone-fold0.0000001368Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0004968Direct
SMAD MH1 domain0.0009004Direct
Protein kinase-like (PK-like)0.0009133Direct
TPR-like0.007106Inherited
CoA-dependent acyltransferases0.007579Inherited
SMAD/FHA domain0.008536Inherited
PapD-like0.0624Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.06759Inherited
Nuclear receptor ligand-binding domain0.2539Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.0009004Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.002411Inherited
    52777,52777
  • 52777 - CoA-dependent acyltransferases
  • 52777 - CoA-dependent acyltransferases
  • 0.01155Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.03594Inherited
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.1866Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)