SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Worm Phenotype (WP): presynaptic region morphology variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ + + 3:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + 2:   cell component morphology variant [WBPhenotype:0002089] <17>(84|85) (84|42|9)
+ + 2:   nervous system morphology variant [WBPhenotype:0000604] <8>(31|28) (33|10|4)
+ 1:   synapse morphology variant [WBPhenotype:0000616] <2>(6|5) (6|2|1)
0:   presynaptic region morphology variant [WBPhenotype:0001321] <4>(2|2) (2|2|1)
- 1:   presynaptic component localization variant [WBPhenotype:0000847] <1>(0|0) (0|0|0)
- 1:   presynaptic vesicle cluster variant [WBPhenotype:0000102] <1>(0|0) (0|0|1)
- 1:   presynaptic vesicle number variant [WBPhenotype:0001669] <1>(0|0) (0|0|0)
- 1:   vesicle maturation defective [WBPhenotype:0002371](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Tubulin nucleotide-binding domain-like0.00001215Direct
Tubulin C-terminal domain-like0.0000157Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Tubulin, GTPase domain0.00002072Direct
Tubulin, C-terminal domain0.00002676Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tubulin nucleotide-binding domain-like0.000009891Direct
Tubulin C-terminal domain-like0.00001279Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0000006433Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000009891Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.00006251Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)