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Worm Phenotype (WP): chemotaxis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + 5:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + 4:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + + 4:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + 3:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + + 3:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ + 2:   chemical response variant [WBPhenotype:0000523] <17>(80|73) (81|30|9)
+ + 2:   chemosensory behavior variant [WBPhenotype:0001049] <3>(20|19) (20|5|0)
+ 1:   chemosensory response variant [WBPhenotype:0001040] <3>(20|19) (20|5|0)
0:   chemotaxis variant [WBPhenotype:0001434] <2>(20|18) (20|5|0)
- 1:   negative chemotaxis variant [WBPhenotype:0000481] <3>(8|6) (8|1|0)
- 1:   positive chemotaxis variant [WBPhenotype:0000635] <3>(12|12) (12|4|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (heterotrimeric G protein), gamma chain0Direct
Transducin (alpha subunit), insertion domain0Direct
Periplasmic binding protein-like I0Direct
Nucleotide cyclase8.972e-16Direct
cAMP-binding domain-like0.000001835Direct
Periplasmic binding protein-like II0.000002967Direct
Glutathione synthetase ATP-binding domain-like0.00003581Direct
P-loop containing nucleoside triphosphate hydrolases0.0000885Direct
Multidrug efflux transporter AcrB transmembrane domain0.0003262Direct
Regulator of G-protein signaling, RGS0.0003731Direct
Ankyrin repeat0.0006131Direct
TPR-like0.0009304Direct
Cysteine-rich domain0.003037Inherited
EGF/Laminin0.004096Inherited
HLH, helix-loop-helix DNA-binding domain0.00554Inherited
WD40 repeat-like0.06034Inherited
Protein kinase-like (PK-like)0.1717Inherited
Voltage-gated potassium channels0.7117Inherited
Nicotinic receptor ligand binding domain-like0.7259Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.7259Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Transducin (heterotrimeric G protein), gamma chain0Direct
L-arabinose binding protein-like0.000000000000009374Direct
Adenylyl and guanylyl cyclase catalytic domain0.00000000000001748Direct
G proteins0.000000002396Direct
cAMP-binding domain0.000002856Direct
Phosphate binding protein-like0.000002856Direct
Multidrug efflux transporter AcrB transmembrane domain0.0004568Direct
Regulator of G-protein signaling, RGS0.0006046Direct
Ankyrin repeat0.002009Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.007852Inherited
HLH, helix-loop-helix DNA-binding domain0.01082Inherited
Protein kinases, catalytic subunit0.1596Inherited
WD40-repeat0.1715Inherited
Nicotinic receptor ligand binding domain-like0.6972Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.6972Inherited
Pleckstrin-homology domain (PH domain)0.8411Inherited
PLC-like (P variant)0.8842Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Transducin (heterotrimeric G protein), gamma chain0Direct
Periplasmic binding protein-like I0Direct
Nucleotide cyclase7.031e-16Direct
cAMP-binding domain-like0.000001486Direct
Periplasmic binding protein-like II0.000002407Direct
Glutathione synthetase ATP-binding domain-like0.00002924Direct
P-loop containing nucleoside triphosphate hydrolases0.00007248Direct
Multidrug efflux transporter AcrB transmembrane domain0.0002688Direct
Regulator of G-protein signaling, RGS0.0003077Direct
Ankyrin repeat0.000508Direct
TPR-like0.0007741Direct
Cysteine-rich domain0.002563Inherited
EGF/Laminin0.00347Inherited
HLH, helix-loop-helix DNA-binding domain0.004712Inherited
WD40 repeat-like0.05373Inherited
Protein kinase-like (PK-like)0.1575Inherited
Voltage-gated potassium channels0.691Inherited
Nicotinic receptor ligand binding domain-like0.7055Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.7055Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    56112,55073
  • 56112 - Protein kinase-like (PK-like)
  • 55073 - Nucleotide cyclase
  • 7.031e-16Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.0004795Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.0005065Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.7055Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)