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Worm Phenotype (WP): neuronal cell fate specification variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + 2:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
+ 1:   cell fate specification variant [WBPhenotype:0000216] <7>(20|18) (20|6|1)
0:   neuronal cell fate specification variant [WBPhenotype:0001510] <4>(9|6) (9|2|0)
- 1:   dopaminergic fate atypical [WBPhenotype:0001964](0|0) (0|0|0)
- 1:   loss of asymmetry ASE [WBPhenotype:0001660](4|3) (4|1|0)
- 1:   loss of asymmetry AWC [WBPhenotype:0001661](0|1) (1|1|0)
- 1:   transdifferentiation defective [WBPhenotype:0002358](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain-like0.000001993Direct
PYP-like sensor domain (PAS domain)0.000005722Direct
HLH, helix-loop-helix DNA-binding domain0.000006698Direct
Voltage-gated potassium channels0.000006783Direct
DEATH domain0.00001007Direct
Homeodomain-like0.0006657Direct
Growth factor receptor domain0.006607Inherited
Fibronectin type III0.3176Inherited
EGF/Laminin0.426Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain0.000002689Direct
Growth factor receptor domain0.000006019Direct
HLH, helix-loop-helix DNA-binding domain0.000006342Direct
Homeodomain0.00007129Direct
Voltage-gated potassium channels0.0006191Direct
I set domains0.1258Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
cAMP-binding domain-like0.000001614Direct
PYP-like sensor domain (PAS domain)0.000004653Direct
HLH, helix-loop-helix DNA-binding domain0.000005448Direct
Voltage-gated potassium channels0.000005517Direct
DEATH domain0.000008192Direct
Homeodomain-like0.000552Direct
Growth factor receptor domain0.005634Inherited
Fibronectin type III0.2982Inherited
EGF/Laminin0.4052Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0002077Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1231Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)