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Worm Phenotype (WP): amphid phasmid sensillum morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ + 2:   nervous system morphology variant [WBPhenotype:0000604] <8>(31|28) (33|10|4)
+ 1:   sensillum morphology variant [WBPhenotype:0000299] <8>(17|15) (19|7|1)
0:   amphid phasmid sensillum morphology variant [WBPhenotype:0001527] <3>(10|7) (12|5|1)
- 1:   amphid phasmid neuron morphology variant [WBPhenotype:0000255] <3>(7|5) (8|5|1)
- 1:   amphid sheath cell morphology variant [WBPhenotype:0000300](0|0) (0|0|0)
- 1:   phasmid socket absent [WBPhenotype:0001225](1|1) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Bromodomain0.000008479Direct
Glutathione synthetase ATP-binding domain-like0.0000988Direct
BAR/IMD domain-like0.0003291Direct
PX domain0.0008637Direct
TPR-like0.2499Inherited
HMG-box0.445Inherited
Tubulin nucleotide-binding domain-like0.445Inherited
ARM repeat0.5338Inherited
SMAD/FHA domain0.9895Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Bromodomain0.00001727Direct
Armadillo repeat0.001272Inherited
G proteins0.04388Inherited
HMG-box0.3899Inherited
Protein kinases, catalytic subunit0.8523Inherited
SMAD domain0.9077Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Bromodomain0.000006894Direct
Glutathione synthetase ATP-binding domain-like0.00008094Direct
BAR/IMD domain-like0.0002712Direct
PX domain0.0007186Direct
Bet v1-like0.0009991Direct
TPR-like0.2321Inherited
HMG-box0.4241Inherited
Tubulin C-terminal domain-like0.4241Inherited
Tubulin nucleotide-binding domain-like0.4241Inherited
ARM repeat0.5118Inherited
SMAD/FHA domain0.9788Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.000206Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.0009991Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1984Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.4241Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.001765Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)