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Worm Phenotype (WP): mitochondria alignment variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   cell component morphology variant [WBPhenotype:0002089] <17>(84|85) (84|42|9)
+ + + 3:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + 2:   mitochondria morphology variant [WBPhenotype:0001401] <3>(17|18) (18|10|2)
+ + 2:   cell component localization variant [WBPhenotype:0002098] <8>(22|24) (23|12|3)
+ 1:   mitochondria spacing variant [WBPhenotype:0001576] <1>(13|14) (14|8|2)
0:   mitochondria alignment variant [WBPhenotype:0001577](13|14) (14|8|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH3-domain0.00000000000002413Direct
SH2 domain0.00000000000006867Direct
PH domain-like0.00000000000056Direct
Second domain of FERM0.0000003319Direct
Calponin-homology domain, CH-domain0.00001024Direct
GTPase activation domain, GAP0.00001257Direct
Spectrin repeat0.00004113Direct
Actin-like ATPase domain0.00004363Direct
Protein kinase-like (PK-like)0.00008321Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0002397Direct
Cysteine-rich domain0.0003048Direct
DBL homology domain (DH-domain)0.0003266Direct
(Phosphotyrosine protein) phosphatases II0.0007186Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SH3-domain0.0000000000005408Direct
SH2 domain0.000000000001511Direct
LIM domain0.00000001917Direct
Second domain of FERM0.0000006428Direct
Third domain of FERM0.000001194Direct
First domain of FERM0.000004011Direct
Pleckstrin-homology domain (PH domain)0.000008563Direct
Actin/HSP700.000009092Direct
Calponin-homology domain, CH-domain0.00002897Direct
Spectrin repeat0.00005015Direct
BCR-homology GTPase activation domain (BH-domain)0.00009491Direct
Protein kinases, catalytic subunit0.0005018Direct
DBL homology domain (DH-domain)0.0006004Direct
I set domains0.0007436Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH3-domain0.00000000000001893Direct
SH2 domain0.00000000000005391Direct
PH domain-like0.0000000000004407Direct
Second domain of FERM0.000000267Direct
Calponin-homology domain, CH-domain0.000008327Direct
GTPase activation domain, GAP0.00001024Direct
Spectrin repeat0.00003361Direct
Actin-like ATPase domain0.00003566Direct
Protein kinase-like (PK-like)0.00006813Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.000197Direct
Cysteine-rich domain0.0002511Direct
DBL homology domain (DH-domain)0.0002691Direct
(Phosphotyrosine protein) phosphatases II0.0005965Direct
Fibronectin type III0.0008613Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000000006196Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0000000397Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0000001225Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000001964Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.00000393Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.00000393Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0000151Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0006932Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000000001314Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.000001233Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)