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Worm Phenotype (WP): oocyte number decreased

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + 4:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(57|57) (58|22|4)
+ + + 3:   cell type morphology variant [WBPhenotype:0002108] <12>(77|76) (79|45|15)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(38|40) (38|15|2)
+ + 2:   germ cell morphology variant [WBPhenotype:0000900] <4>(44|41) (45|23|8)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <7>(54|57) (55|22|4)
+ 1:   oocyte morphology variant [WBPhenotype:0001260] <9>(27|30) (27|14|3)
+ 1:   oogenesis variant [WBPhenotype:0000186] <5>(33|34) (33|14|2)
0:   oocyte number decreased [WBPhenotype:0001944](8|7) (8|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Translation proteins SH3-like domain0.000000009723Direct
Nucleic acid-binding proteins0.00000004453Direct
L30e-like0.000002722Direct
Ribosomal proteins S24e, L23 and L15e0.00000488Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000009323Direct
Translational machinery components0.000014Direct
ACP-like0.00003136Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0001047Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Anticodon-binding domain0.000001591Direct
Cold shock DNA-binding domain-like0.000005672Direct
L30e/L7ae ribosomal proteins0.00000756Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0001613Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.0002503Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.0002587Direct
Nitrogenase iron protein-like0.0003916Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Translation proteins SH3-like domain0.000000007753Direct
Nucleic acid-binding proteins0.00000003563Direct
L30e-like0.000002208Direct
Ribosomal proteins S24e, L23 and L15e0.000003967Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000007585Direct
Translational machinery components0.0000114Direct
ACP-like0.0000256Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.00008579Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.000003967Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.0000256Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.00008579Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.00008579Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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