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Worm Phenotype (WP): germ cell compartment size variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + 4:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + + 3:   cell type morphology variant [WBPhenotype:0002108] <12>(77|76) (79|45|15)
+ + 2:   germ cell morphology variant [WBPhenotype:0000900] <4>(44|41) (45|23|8)
+ 1:   germ cell compartment morphology variant [WBPhenotype:0001969] <4>(25|26) (25|10|2)
0:   germ cell compartment size variant [WBPhenotype:0001973] <2>(4|6) (4|2|0)
- 1:   germ cell compartment large [WBPhenotype:0001975](0|0) (0|0|0)
- 1:   germ cell compartment small [WBPhenotype:0001974](0|1) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Helical domain of Sec23/240Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
beta-sandwich domain of Sec23/240.0000001613Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
beta-sandwich domain of Sec23/240Direct
Helical domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
Trunk domain of Sec23/240Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Extended AAA-ATPase domain0.4517Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C-terminal, gelsolin-like domain of Sec23/240Direct
Helical domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
beta-sandwich domain of Sec23/240.0000001294Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)