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Worm Phenotype (WP): roaming variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(119|121) (119|54|20)
+ + + 3:   movement variant [WBPhenotype:0001206] <4>(48|56) (48|25|14)
+ + 2:   locomotion variant [WBPhenotype:0000643] <4>(46|52) (46|23|12)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <20>(119|121) (119|54|20)
+ 1:   foraging behavior variant [WBPhenotype:0000662] <8>(13|15) (13|5|1)
+ 1:   activity level variant [WBPhenotype:0000641] <6>(23|27) (24|11|5)
0:   roaming variant [WBPhenotype:0002315] <2>(7|9) (7|2|0)
- 1:   roaming increased [WBPhenotype:0002319](2|4) (2|1|0)
- 1:   roaming reduced [WBPhenotype:0001639](2|1) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000000001374Direct
SMAD MH1 domain0.000002018Direct
Nicotinic receptor ligand binding domain-like0.00004537Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00004537Direct
SMAD/FHA domain0.00004862Direct
SNF-like0.008209Inherited
Homeodomain-like0.01775Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000000002399Direct
G proteins0.00000169Direct
SMAD MH1 domain0.000004268Direct
SMAD domain0.00001875Direct
Nicotinic receptor ligand binding domain-like0.00006375Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00006375Direct
Homeodomain0.007756Inherited
SNF-like0.008649Inherited
Pyridoxal-dependent decarboxylase0.02057Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000000001088Direct
SMAD MH1 domain0.000001636Direct
Nicotinic receptor ligand binding domain-like0.00003708Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00003708Direct
SMAD/FHA domain0.00003977Direct
SNF-like0.007029Inherited
Homeodomain-like0.01542Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000000001088Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00003708Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)